RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 LMBRD1Q9NUN5 540 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 MYO1AQ9UBC5 1043 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-214ENST00000483925 ST6GALNAC2Q9UJ37 374 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 TMPRSS11EQ9UL52 423 aa5.1□□□□□ -1.59
PTCD3-214ENST00000483925 USP19O94966 1318 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 PABPN1LA6NDY0 278 aaKnown RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 FAM171A2A8MVW0 826 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SUV39H1O43463 412 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 B4GALT3O60512 393 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CYP1A1P04798 512 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 ALOX15P16050 662 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 FGFR2P21802 821 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 LIFRP42702 1097 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 MCAMP43121 646 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 PAPOLAP51003 745 aaKnown RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SUMO3P55854 103 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 POLE2P56282 527 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 VAMP2P63027 116 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CCT2P78371 535 aaKnown RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 ZBED6P86452 979 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 MAPK7Q13164 816 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 NOGQ13253 232 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 IL10RAQ13651 578 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 TRIM25Q14258 630 aaKnown RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SPARCL1Q14515 664 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 PSMD6Q15008 389 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SEC23AQ15436 765 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CHRNA2Q15822 529 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CR1LQ2VPA4 569 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 GJC2Q5T442 439 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CFAP58Q5T655 872 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 KLHDC7AQ5VTJ3 777 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 BTBD8Q5XKL5 378 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 KIAA1841Q6NSI8 718 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 PLEKHH3Q7Z736 793 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SESTD1Q86VW0 696 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 HEATR4Q86WZ0 1026 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CHCHD4Q8N4Q1 142 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 OR10H5Q8NGA6 315 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SPPL3Q8TCT6 385 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SH3RF3Q8TEJ3 882 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 ERCC4Q92889 916 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 KAT5Q92993 513 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 IQCDQ96DY2 449 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SORCS2Q96PQ0 1159 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 NELL2Q99435 816 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 C7orf25Q9BPX7 421 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SDF4Q9BRK5 362 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CENPOQ9BU64 300 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 SARS2Q9NP81 518 aaKnown RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 PNPOQ9NVS9 261 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CWC25Q9NXE8 425 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-214ENST00000483925 KIF17Q9P2E2 1029 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 AASSQ9UDR5 926 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 STAP2Q9UGK3 403 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 PRSS50Q9UI38 385 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 GPR34Q9UPC5 381 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 TSC22D4Q9Y3Q8 395 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 CDY2AQ9Y6F7 541 aa5.09□□□□□ -1.59
PTCD3-214ENST00000483925 PRAMEF25A6NGN4 478 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 B4DLN1 442 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 F8W8V4 182 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 IPO5O00410 1097 aaKnown RBP5.08□□□□□ -1.6
PTCD3-214ENST00000483925 TOR1BO14657 336 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 THAP12O43422 761 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 SGTAO43765 313 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 PFKMP08237 780 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 KITP10721 976 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ATP1A3P13637 1013 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 C6P13671 934 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ZNF28P17035 718 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 PTPN1P18031 435 aaKnown RBP5.08□□□□□ -1.6
PTCD3-214ENST00000483925 FPR2P25090 351 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 IL13P35225 146 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 EPHA5P54756 1037 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 DCAF7P61962 342 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 HERVK_113P62684 666 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ADCY2Q08462 1091 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ADAM9Q13443 819 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 PLS1Q14651 629 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 TIGD6Q17RP2 521 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 TANGO2Q6ICL3 276 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 FBXO38Q6PIJ6 1188 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 BTNL9Q6UXG8 535 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 SPRED1Q7Z699 444 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 MOGAT3Q86VF5 341 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 FTSJ3Q8IY81 847 aaKnown RBP5.08□□□□□ -1.6
PTCD3-214ENST00000483925 SIMC1Q8NDZ2 872 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ZMIZ2Q8NF64 920 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 CYP2W1Q8TAV3 490 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 FAM71BQ8TC56 605 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 RFFLQ8WZ73 363 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ATP6V1E2Q96A05 226 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 GBP4Q96PP9 640 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 CDK5RAP1Q96SZ6 601 aaKnown RBP5.08□□□□□ -1.6
PTCD3-214ENST00000483925 L2HGDHQ9H9P8 463 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 SAYSD1Q9NPB0 183 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 RIC8BQ9NVN3 520 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 PIH1D1Q9NWS0 290 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms