RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 DNAJC7Q99615 494 aa20.39■□□□□ 0.85
PCCB-216ENST00000483687 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.39■□□□□ 0.852e-7■■□□□ 14
PCCB-216ENST00000483687 MRPL9Q9BYD2 267 aaKnown RBP20.39■□□□□ 0.85
PCCB-216ENST00000483687 MYO6Q9UM54 1294 aa20.39■□□□□ 0.85
PCCB-216ENST00000483687 F8VZ95 297 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 P4HA1P13674 534 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 TAF6P49848 677 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 UPP1Q16831 310 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 TMEM240Q5SV17 173 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 SCARA5Q6ZMJ2 495 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 ZNF280BQ86YH2 543 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 LRRC8AQ8IWT6 810 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 UROC1Q96N76 676 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 PANX2Q96RD6 677 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 PAAF1Q9BRP4 392 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 POLIQ9UNA4 740 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 PTPRSQ13332 1948 aa20.38■□□□□ 0.85
PCCB-216ENST00000483687 DGKIO75912 1065 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 DDHD2O94830 711 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 STAT1P42224 750 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 ASPAP45381 313 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 TNNC1P63316 161 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 SV2CQ496J9 727 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 SFMBT2Q5VUG0 894 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 FAM117BQ6P1L5 589 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 TMCO2Q7Z6W1 182 aaPredicted RBP20.37■□□□□ 0.85
PCCB-216ENST00000483687 RABGGTAQ92696 567 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 DDX27Q96GQ7 796 aaKnown RBP20.37■□□□□ 0.85
PCCB-216ENST00000483687 GPR88Q9GZN0 384 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 NR2E3Q9Y5X4 410 aa20.37■□□□□ 0.85
PCCB-216ENST00000483687 PNMA6AP0CW24 399 aaPredicted RBP20.36■□□□□ 0.85
PCCB-216ENST00000483687 LILRA4P59901 499 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 DSC1Q08554 894 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 PAN2Q504Q3 1202 aaKnown RBP20.36■□□□□ 0.85
PCCB-216ENST00000483687 GPIHBP1Q8IV16 184 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 LRRC43Q8N309 656 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 FAXDC2Q96IV6 333 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 MMS19Q96T76 1030 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 ZNHIT6Q9NWK9 470 aaKnown RBP20.36■□□□□ 0.85
PCCB-216ENST00000483687 SNX9Q9Y5X1 595 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 KPNA7A9QM74 516 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 FOXN3O00409 490 aaPredicted RBP20.36■□□□□ 0.85
PCCB-216ENST00000483687 B4GALT3O60512 393 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 SOX5P35711 763 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 E4F1Q66K89 784 aaPredicted RBP20.36■□□□□ 0.85
PCCB-216ENST00000483687 COLGALT2Q8IYK4 626 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 SHC3Q92529 594 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 JAKMIP2Q96AA8 810 aa20.36■□□□□ 0.85
PCCB-216ENST00000483687 SPTLC1O15269 473 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 B3GAT3O94766 335 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 WEE2P0C1S8 567 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 USP8P40818 1118 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 ARID5AQ03989 594 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 FMNL3Q8IVF7 1028 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 C3orf58Q8NDZ4 430 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 SYN2Q92777 582 aaPredicted RBP20.35■□□□□ 0.85
PCCB-216ENST00000483687 TRIM44Q96DX7 344 aaPredicted RBP20.35■□□□□ 0.85
PCCB-216ENST00000483687 BCO2Q9BYV7 579 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 SMYD3Q9H7B4 428 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 NRDE2Q9H7Z3 1164 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 AIPL1Q9NZN9 384 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 CXXC1Q9P0U4 656 aaPredicted RBP20.35■□□□□ 0.85
PCCB-216ENST00000483687 DNAJB4Q9UDY4 337 aa20.35■□□□□ 0.85
PCCB-216ENST00000483687 GFPT2O94808 682 aa20.34■□□□□ 0.85
PCCB-216ENST00000483687 CD58P19256 250 aa20.34■□□□□ 0.85
PCCB-216ENST00000483687 HNRNPH3P31942 346 aaKnown RBP20.34■□□□□ 0.85
PCCB-216ENST00000483687 RAP1GAPP47736 663 aa20.34■□□□□ 0.85
PCCB-216ENST00000483687 OR1G1P47890 313 aa20.34■□□□□ 0.85
PCCB-216ENST00000483687 ASIC2Q16515 512 aa20.34■□□□□ 0.85
PCCB-216ENST00000483687 HERVK_113Q902F9 699 aa20.34■□□□□ 0.85
PCCB-216ENST00000483687 ZNF830Q96NB3 372 aaPredicted RBP20.34■□□□□ 0.85
PCCB-216ENST00000483687 BAG1Q99933 345 aaPredicted RBP20.34■□□□□ 0.85
PCCB-216ENST00000483687 NRDCO43847 1150 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 KRT5P13647 590 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 IGFBP6P24592 240 aaPredicted RBP20.33■□□□□ 0.85
PCCB-216ENST00000483687 YWHAEP62258 255 aaKnown RBP20.33■□□□□ 0.85
PCCB-216ENST00000483687 WDR59Q6PJI9 974 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 DCLRE1AQ6PJP8 1040 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 ZNF689Q96CS4 500 aaPredicted RBP20.33■□□□□ 0.85
PCCB-216ENST00000483687 CYP3A43Q9HB55 503 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 CISHQ9NSE2 258 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 GDAP2Q9NXN4 497 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 HCSTQ9UBK5 93 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 PCDHB4Q9Y5E5 795 aa20.33■□□□□ 0.85
PCCB-216ENST00000483687 CEP290O15078 2479 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 COL4A6Q14031 1691 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 FERP16591 822 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 ACO1P21399 889 aaKnown RBP20.33■□□□□ 0.84
PCCB-216ENST00000483687 CDH8P55286 799 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 MEA1Q16626 185 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 TMEM270Q6UE05 265 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 FAM71AQ8IYT1 594 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 CCDC112Q8NEF3 446 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 HASPINQ8TF76 798 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 YME1L1Q96TA2 773 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 SDCBP2Q9H190 292 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 MTIF3Q9H2K0 278 aaKnown RBP20.33■□□□□ 0.84
PCCB-216ENST00000483687 KCNF1Q9H3M0 494 aa20.33■□□□□ 0.84
PCCB-216ENST00000483687 PRG3Q9Y2Y8 225 aaPredicted RBP20.33■□□□□ 0.84
PCCB-216ENST00000483687 HUS1O60921 280 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms