RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 HOXB8P17481 243 aaPredicted RBP9.47□□□□□ -0.89
SNX4-205ENST00000482965 TNNI1P19237 187 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 PAX3P23760 479 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 NR2F2P24468 414 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 RPL13P26373 211 aaKnown RBP9.47□□□□□ -0.89
SNX4-205ENST00000482965 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
SNX4-205ENST00000482965 PRCPP42785 496 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 AARSP49588 968 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX4-205ENST00000482965 TAF6P49848 677 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 CLCN4P51793 760 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 LILRA4P59901 499 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 SMAD4Q13485 552 aaKnown RBP9.47□□□□□ -0.89
SNX4-205ENST00000482965 CAMK4Q16566 473 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 NFIL3Q16649 462 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 DUOXA2Q1HG44 320 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 SV2CQ496J9 727 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 COBLL1Q53SF7 1204 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
SNX4-205ENST00000482965 ELMSAN1Q6PJG2 1045 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 USP37Q86T82 979 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 PALB2Q86YC2 1186 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 WDR49Q8IV35 697 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 CSGALNACT2Q8N6G5 542 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 C1orf127Q8N9H9 656 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.47□□□□□ -0.89
SNX4-205ENST00000482965 MSLNLQ96KJ4 702 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 FAM84AQ96KN4 292 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 SENP8Q96LD8 212 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 MFSD14AQ96MC6 490 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 CGRRF1Q99675 332 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 TSG101Q99816 390 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 CLSTN3Q9BQT9 956 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 APOL5Q9BWW9 433 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 LMBRD1Q9NUN5 540 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 MTRRQ9UBK8 725 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 ITGA11Q9UKX5 1188 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 AGAP1Q9UPQ3 857 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 BACE2Q9Y5Z0 518 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 COL6A3P12111 3177 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 PTPRJQ12913 1337 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 TSC2P49815 1807 aa9.47□□□□□ -0.89
SNX4-205ENST00000482965 GRXCR2A6NFK2 248 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 PSMA7O14818 248 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 SPTLC1O15269 473 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 ADAM12O43184 909 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 MBTPS2O43462 519 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 TGM5O43548 720 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 SPATA31D3P0C874 917 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 TYMPP19971 482 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 OR1D2P34982 312 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 PPP1R2P41236 205 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 PNPLA4P41247 253 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 CASP4P49662 377 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 RBP5P82980 135 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 YWHAHQ04917 246 aaPredicted RBP9.46□□□□□ -0.9
SNX4-205ENST00000482965 BFSP1Q12934 665 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 ADAM9Q13443 819 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 MORC3Q14149 939 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 EDRF1Q3B7T1 1238 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 CTXN3Q4LDR2 81 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 ZCWPW2Q504Y3 356 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 RARS2Q5T160 578 aaKnown RBP9.46□□□□□ -0.9
SNX4-205ENST00000482965 ZNF280DQ6N043 979 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 SYCE2Q6PIF2 218 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 SPATA31D4Q6ZUB0 917 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 ADSSL1Q8N142 457 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 SMRP1Q8NCR6 262 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 OR5B17Q8NGF7 314 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 TMEM174Q8WUU8 243 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 POP1Q99575 1024 aaKnown RBP9.46□□□□□ -0.9
SNX4-205ENST00000482965 CLSTN2Q9H4D0 955 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 MAN1C1Q9NR34 630 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 DPP7Q9UHL4 492 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 TIMM13Q9Y5L4 95 aaPredicted RBP9.46□□□□□ -0.9
SNX4-205ENST00000482965 CDY1Q9Y6F8 540 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 C2orf16Q68DN1 1984 aa9.46□□□□□ -0.9
SNX4-205ENST00000482965 KPNA7A9QM74 516 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 CYB561D2O14569 222 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 CETN3O15182 167 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 MAPK13O15264 365 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 PHACTR2O75167 634 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 C1RP00736 705 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 BMP1P13497 986 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 KRT13P13646 458 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 IL9P15248 144 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 CCNE1P24864 410 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 PSMC2P35998 433 aaKnown RBP9.45□□□□□ -0.9
SNX4-205ENST00000482965 ARPP19P56211 112 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 BIRC3Q13489 604 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 RAB33AQ14088 237 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 MRPL58Q14197 206 aaKnown RBP9.45□□□□□ -0.9
SNX4-205ENST00000482965 OVOS1Q6IE37 1185 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 CENPPQ6IPU0 288 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 KLHL10Q6JEL2 608 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 CES5AQ6NT32 575 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
SNX4-205ENST00000482965 TRAPPC11Q7Z392 1133 aa9.45□□□□□ -0.9
SNX4-205ENST00000482965 METTL23Q86XA0 190 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms