RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 SMAD5Q99717 465 aaKnown RBP4.83□□□□□ -1.64
GTF3A-207ENST00000482655 TUBD1Q9UJT1 453 aa4.83□□□□□ -1.64
GTF3A-207ENST00000482655 DMTF1Q9Y222 760 aa4.83□□□□□ -1.64
GTF3A-207ENST00000482655 PCDHA13Q9Y5I0 950 aa4.83□□□□□ -1.64
GTF3A-207ENST00000482655 MAPKBP1O60336 1514 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 TSPOAP1O95153 1857 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 MAST3O60307 1309 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 NOMO3P69849 1222 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 KIF23Q02241 960 aaPredicted RBP4.82□□□□□ -1.64
GTF3A-207ENST00000482655 FOXI1Q12951 378 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 CYP2A13Q16696 494 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 NOMO2Q5JPE7 1267 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 ZNF575Q86XF7 245 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 PTCD3Q96EY7 689 aaKnown RBP4.82□□□□□ -1.64
GTF3A-207ENST00000482655 PACSIN1Q9BY11 444 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 PCGF6Q9BYE7 350 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 TMEM74BQ9NUR3 256 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 INSL6Q9Y581 213 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 ABCA10Q8WWZ4 1543 aa4.82□□□□□ -1.64
GTF3A-207ENST00000482655 WASHC2CQ9Y4E1 1318 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 TRGV11A0A075B6L2 103 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 MYADML2A6NDP7 307 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 GRM6O15303 877 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 SGTAO43765 313 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 ALDH1L1O75891 902 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 FCER1AP12319 257 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 TYRP1P17643 537 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 VAV2P52735 878 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 EPHB1P54762 984 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 KRT85P78386 507 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 SCAPQ12770 1279 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 TARDBPQ13148 414 aaKnown RBP eCLIP4.81□□□□□ -1.64
GTF3A-207ENST00000482655 RAB39AQ14964 217 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 UAP1L1Q3KQV9 507 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
GTF3A-207ENST00000482655 EFCAB2Q5VUJ9 269 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 Q6ZNX1 250 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 ADGRG3Q86Y34 549 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 AOPEPQ8N6M6 819 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 FUBP1Q96AE4 644 aaKnown RBP4.81□□□□□ -1.64
GTF3A-207ENST00000482655 TEKT5Q96M29 485 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 CHPF2Q9P2E5 772 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 LRIT1Q9P2V4 623 aa4.81□□□□□ -1.64
GTF3A-207ENST00000482655 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.81□□□□□ -1.64
GTF3A-207ENST00000482655 CCDC78A2IDD5 438 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 CCDC154A6NI56 674 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 GABRDO14764 452 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 HTRA2O43464 458 aaPredicted RBP4.8□□□□□ -1.64
GTF3A-207ENST00000482655 PARNO95453 639 aaKnown RBP4.8□□□□□ -1.64
GTF3A-207ENST00000482655 CD1AP06126 327 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 CCND1P24385 295 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 PLA2G5P39877 138 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 MRPS35P82673 323 aaKnown RBP4.8□□□□□ -1.64
GTF3A-207ENST00000482655 SLFN5Q08AF3 891 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 ZNF844Q08AG5 666 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 PTPN21Q16825 1174 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 GEN1Q17RS7 908 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.8□□□□□ -1.64
GTF3A-207ENST00000482655 DCBLD1Q8N8Z6 715 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 CAGE1Q8TC20 777 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 IFI44Q8TCB0 444 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 CLPTM1LQ96KA5 538 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 AIFM2Q9BRQ8 373 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 SYNPO2LQ9H987 977 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 UNKLQ9H9P5 680 aaKnown RBP4.8□□□□□ -1.64
GTF3A-207ENST00000482655 MAN1C1Q9NR34 630 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 PTGFRNQ9P2B2 879 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 HSFX1Q9UBD0 423 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 LIMCH1Q9UPQ0 1083 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 CDYLQ9Y232 598 aa4.8□□□□□ -1.64
GTF3A-207ENST00000482655 PRG4Q92954 1404 aaPredicted RBP4.8□□□□□ -1.64
GTF3A-207ENST00000482655 PCDHGA12O60330 932 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 AGFG2O95081 481 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 MPLP40238 635 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 IL10RAQ13651 578 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 TTF1Q15361 905 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PCBP2Q15366 365 aaKnown RBP eCLIP4.79□□□□□ -1.64
GTF3A-207ENST00000482655 C3orf36Q3SXR2 165 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PRR16Q569H4 304 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 UTP14CQ5TAP6 766 aaKnown RBP4.79□□□□□ -1.64
GTF3A-207ENST00000482655 RD3Q7Z3Z2 195 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 CLNKQ7Z7G1 428 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PRIMA1Q86XR5 153 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 ACTRT2Q8TDY3 377 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 NELL1Q92832 810 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 NACC2Q96BF6 587 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 DUSP26Q9BV47 211 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 RSAD1Q9HA92 442 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 KIAA1586Q9HCI6 787 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 JKAMPQ9P055 326 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 TLK1Q9UKI8 766 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 SPEF1Q9Y4P9 236 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 IPPQ9Y573 584 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PCDHGA9Q9Y5G4 932 aaKnown RBP4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PCDHGA8Q9Y5G5 932 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PCDHGA7Q9Y5G6 932 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PCDHGA6Q9Y5G7 932 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 PCDHGA3Q9Y5H0 932 aa4.79□□□□□ -1.64
GTF3A-207ENST00000482655 CFAP20Q9Y6A4 193 aaKnown RBP4.79□□□□□ -1.64
GTF3A-207ENST00000482655 EID1Q9Y6B2 187 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms