RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 HTATIP2Q9BUP3 242 aa7.57□□□□□ -1.2
CLK1-212ENST00000482590 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
CLK1-212ENST00000482590 CCDC8Q9H0W5 538 aaPredicted RBP7.57□□□□□ -1.2
CLK1-212ENST00000482590 DDX4Q9NQI0 724 aaKnown RBP7.57□□□□□ -1.2
CLK1-212ENST00000482590 RAI14Q9P0K7 980 aa7.57□□□□□ -1.2
CLK1-212ENST00000482590 IPPQ9Y573 584 aa7.57□□□□□ -1.2
CLK1-212ENST00000482590 BICDL2A1A5D9 508 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 C22orf46C9J442 243 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 DDX3XO00571 662 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLK1-212ENST00000482590 PLD2O14939 933 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 ADCY3O60266 1144 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 CTNND1O60716 968 aaKnown RBP7.56□□□□□ -1.2
CLK1-212ENST00000482590 HIP1RO75146 1068 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 CCL5P13501 91 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 DDIT3P35638 169 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 RARSP54136 660 aaKnown RBP7.56□□□□□ -1.2
CLK1-212ENST00000482590 MECOMQ03112 1051 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 G3BP1Q13283 466 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLK1-212ENST00000482590 MTX1Q13505 466 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 FNDC3BQ53EP0 1204 aaKnown RBP7.56□□□□□ -1.2
CLK1-212ENST00000482590 BORAQ6PGQ7 559 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 LIMS2Q7Z4I7 341 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 FAM124AQ86V42 546 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 SLC16A11Q8NCK7 471 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 SEC14L1Q92503 715 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 ARHGAP45Q92619 1136 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 FRAT1Q92837 279 aaPredicted RBP7.56□□□□□ -1.2
CLK1-212ENST00000482590 PUS7LQ9H0K6 701 aaKnown RBP7.56□□□□□ -1.2
CLK1-212ENST00000482590 OSBPL5Q9H0X9 879 aaPredicted RBP7.56□□□□□ -1.2
CLK1-212ENST00000482590 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLK1-212ENST00000482590 PLCB1Q9NQ66 1216 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 ST6GALNAC2Q9UJ37 374 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 AGTPBP1Q9UPW5 1226 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 SLC45A1Q9Y2W3 748 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 RABGAP1Q9Y3P9 1069 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 AFG3L2Q9Y4W6 797 aa7.56□□□□□ -1.2
CLK1-212ENST00000482590 BAZ2AQ9UIF9 1905 aaKnown RBP7.56□□□□□ -1.2
CLK1-212ENST00000482590 PARP14Q460N5 1801 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 GPR75-ASB3A0A0A6YYF3 556 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 IPO8O15397 1037 aaKnown RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 GPR39O43194 453 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 FSHBP01225 129 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 GNAI2P04899 355 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 GJB1P08034 283 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 UQCRFS1P1P0C7P4 283 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 FXR1P51114 621 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLK1-212ENST00000482590 LONRF1Q17RB8 773 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 FAM110CQ1W6H9 321 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 TTC39AQ5SRH9 613 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 VHLLQ6RSH7 139 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 LHFPL2Q6ZUX7 228 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 LRRTM3Q86VH5 581 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 ZC3H18Q86VM9 953 aaKnown RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 FAM178BQ8IXR5 827 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 TEX11Q8IYF3 940 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 BVESQ8NE79 360 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 CHST13Q8NET6 341 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 U2AF1L4Q8WU68 220 aaKnown RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 DVL3Q92997 716 aaPredicted RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 GJA10Q969M2 543 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 COA7Q96BR5 231 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 NSUN4Q96CB9 384 aaKnown RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 TTC14Q96N46 770 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 SCLT1Q96NL6 688 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 CSRNP2Q9H175 543 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 INTS7Q9NVH2 962 aaKnown RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 HMG20BQ9P0W2 317 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 LRP2BPQ9P2M1 347 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 GABRQQ9UN88 632 aa7.55□□□□□ -1.2
CLK1-212ENST00000482590 COL11A1P12107 1806 aaPredicted RBP7.55□□□□□ -1.2
CLK1-212ENST00000482590 ZNF536O15090 1300 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 PLXNA1Q9UIW2 1896 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 B2RBV5 119 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 H0YGN5 161 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 BAG3O95817 575 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 STAT5AP42229 794 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 MCAMP43121 646 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 SLC6A11P48066 632 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 FLT3LGP49771 235 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 CYP4F3Q08477 520 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 CCDC158Q5M9N0 1113 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 MRM1Q6IN84 353 aaKnown RBP7.54□□□□□ -1.2
CLK1-212ENST00000482590 NAA16Q6N069 864 aaPredicted RBP7.54□□□□□ -1.2
CLK1-212ENST00000482590 PDXDC1Q6P996 788 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 C6orf15Q6UXA7 325 aaPredicted RBP7.54□□□□□ -1.2
CLK1-212ENST00000482590 ATF7IPQ6VMQ6 1270 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 MILR1Q7Z6M3 343 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 FAM126BQ8IXS8 530 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 ANKRD13CQ8N6S4 541 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 TRIM8Q9BZR9 551 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 AATFQ9NY61 560 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLK1-212ENST00000482590 HERC5Q9UII4 1024 aaKnown RBP7.54□□□□□ -1.2
CLK1-212ENST00000482590 A0A0G2JMZ2 1700 aa7.54□□□□□ -1.2
CLK1-212ENST00000482590 ZNFX1Q9P2E3 1918 aaKnown RBP7.54□□□□□ -1.2
CLK1-212ENST00000482590 SZT2Q5T011 3432 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms