RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SPTLC1O15269 473 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 SERPINC1P01008 464 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 RPL9P32969 192 aaKnown RBP14.24□□□□□ -0.13
HDAC1-208ENST00000482310 TAF6P49848 677 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 COPB1P53618 953 aaKnown RBP14.24□□□□□ -0.13
HDAC1-208ENST00000482310 AP3M2P53677 418 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 ERVK-21P61565 698 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 ZNF699Q32M78 642 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 ZACNQ401N2 412 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 VWA3BQ502W6 1294 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 MIIPQ5JXC2 388 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 FUT10Q6P4F1 479 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 DCLRE1AQ6PJP8 1040 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 DSTYKQ6XUX3 929 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 SEMA4DQ92854 862 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 HPDLQ96IR7 371 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 ANP32EQ9BTT0 268 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 VN1R3Q9BXE9 311 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 GPR62Q9BZJ7 368 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 ZNF576Q9H609 170 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 GCNT4Q9P109 453 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 NXF1Q9UBU9 619 aaKnown RBP14.24□□□□□ -0.13
HDAC1-208ENST00000482310 POLIQ9UNA4 740 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 RWDD3Q9Y3V2 267 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 TIMM13Q9Y5L4 95 aaPredicted RBP14.24□□□□□ -0.13
HDAC1-208ENST00000482310 CDH23Q9H251 3354 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 REV3LO60673 3130 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 PIRO00625 290 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 N4BP1O75113 896 aaKnown RBP14.23□□□□□ -0.13
HDAC1-208ENST00000482310 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
HDAC1-208ENST00000482310 GTF2H1P32780 548 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 PPM1AP35813 382 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 RAP1GAPP47736 663 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 MYO1EQ12965 1108 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 GPM6BQ13491 265 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 SV2CQ496J9 727 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 TIGD5Q53EQ6 642 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 FAM171A1Q5VUB5 890 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 CD300LGQ6UXG3 332 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 C15orf39Q6ZRI6 1047 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 TAS1R1Q7RTX1 841 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 FBXL13Q8NEE6 735 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 CXorf38Q8TB03 319 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 AUTS2Q8WXX7 1259 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 MMS19Q96T76 1030 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 IMPG2Q9BZV3 1241 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 NDST4Q9H3R1 872 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 PCDHGC5Q9Y5F6 944 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 SNX9Q9Y5X1 595 aa14.23□□□□□ -0.13
HDAC1-208ENST00000482310 SF3B1O75533 1304 aaKnown RBP eCLIP14.22□□□□□ -0.134e-6■■■■■ 58.8
HDAC1-208ENST00000482310 GRM6O15303 877 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 CDR1P51861 262 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 LILRA4P59901 499 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 TNNC1P63316 161 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 NOP14P78316 857 aaKnown RBP14.22□□□□□ -0.13
HDAC1-208ENST00000482310 FANCCQ00597 558 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 APBA1Q02410 837 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 KRT17Q04695 432 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 ENPEPQ07075 957 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 WDR72Q3MJ13 1102 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 ZNF697Q5TEC3 545 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 PLPP4Q5VZY2 271 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 VPS52Q8N1B4 723 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 CCDC150Q8NCX0 1101 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 SENP8Q96LD8 212 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 SAMD11Q96NU1 681 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 C11orf84Q9BUA3 381 aaPredicted RBP14.22□□□□□ -0.13
HDAC1-208ENST00000482310 INTS2Q9H0H0 1204 aaKnown RBP14.22□□□□□ -0.13
HDAC1-208ENST00000482310 TTYH1Q9H313 450 aaPredicted RBP14.22□□□□□ -0.13
HDAC1-208ENST00000482310 PRDM12Q9H4Q4 367 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 ENTPD7Q9NQZ7 604 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 RAB20Q9NX57 234 aa14.22□□□□□ -0.13
HDAC1-208ENST00000482310 LIMA1Q9UHB6 759 aaKnown RBP14.22□□□□□ -0.13
HDAC1-208ENST00000482310 KPNA7A9QM74 516 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 CYB561D2O14569 222 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 ODC1P11926 461 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 DNAJB1P25685 340 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 PNPLA4P41247 253 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 KLK7P49862 253 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 UBXN1Q04323 297 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 CETN1Q12798 172 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 ZNF667Q5HYK9 610 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 WDR44Q5JSH3 913 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 PRSS55Q6UWB4 352 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-208ENST00000482310 GBP6Q6ZN66 633 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 GLYCTKQ8IVS8 523 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
HDAC1-208ENST00000482310 LRRC52Q8N7C0 313 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 POF1BQ8WVV4 589 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 PCMTD1Q96MG8 357 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-208ENST00000482310 PLVAPQ9BX97 442 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 SMYD3Q9H7B4 428 aa14.21□□□□□ -0.13
HDAC1-208ENST00000482310 APOBEC3GQ9HC16 384 aaKnown RBP14.21□□□□□ -0.13
HDAC1-208ENST00000482310 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-208ENST00000482310 MTCL1Q9Y4B5 1905 aaKnown RBP14.21□□□□□ -0.14
HDAC1-208ENST00000482310 SPTBN5Q9NRC6 3674 aaKnown RBP14.2□□□□□ -0.14
HDAC1-208ENST00000482310 LGALS16A8MUM7 142 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 C5orf67F2Z3F1 127 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 TMEM189-UBE2V1I3L0A0 370 aa14.2□□□□□ -0.14
HDAC1-208ENST00000482310 TEX33O43247 280 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms