RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SCARA3Q6AZY7 606 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 DPH6Q7L8W6 267 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 TMEM169Q96HH4 297 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 SUSD3Q96L08 255 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 ERGIC2Q96RQ1 377 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 NKX2-4Q9H2Z4 354 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 M0QZQ0 153 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 CTNNB1P35222 781 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 PBX3P40426 434 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 KRT17Q04695 432 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 ZNF699Q32M78 642 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 WDR44Q5JSH3 913 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 SMYD5Q6GMV2 418 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 RNF168Q8IYW5 571 aaPredicted RBP22.27■■□□□ 1.16
VPS16-207ENST00000481812 RABGGTAQ92696 567 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 TIFAQ96CG3 184 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 NAP1L5Q96NT1 182 aaPredicted RBP22.27■■□□□ 1.16
VPS16-207ENST00000481812 GCNT4Q9P109 453 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 LZTS1Q9Y250 596 aa22.27■■□□□ 1.16
VPS16-207ENST00000481812 SF3B1O75533 1304 aaKnown RBP eCLIP22.27■■□□□ 1.168e-6■■■■■ 107
VPS16-207ENST00000481812 TMEM265A0A087WTH1 108 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 SPTLC1O15269 473 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 CBFA2T2O43439 604 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 FGF18O76093 207 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 ITGB1P05556 798 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 TPM3P06753 285 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 P4HA1P13674 534 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 NOP14P78316 857 aaKnown RBP22.26■■□□□ 1.15
VPS16-207ENST00000481812 UBXN1Q04323 297 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 UBE3AQ05086 875 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 KCNMA1Q12791 1236 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 TIGD5Q53EQ6 642 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 ZNF667Q5HYK9 610 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 PPP2R2DQ66LE6 453 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 FUT10Q6P4F1 479 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 LIMS2Q7Z4I7 341 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 DDX53Q86TM3 631 aaKnown RBP22.26■■□□□ 1.15
VPS16-207ENST00000481812 TMEM173Q86WV6 379 aaPredicted RBP22.26■■□□□ 1.15
VPS16-207ENST00000481812 SPATA18Q8TC71 538 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 BCL7CQ8WUZ0 217 aaPredicted RBP22.26■■□□□ 1.15
VPS16-207ENST00000481812 SENP8Q96LD8 212 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 C17orf80Q9BSJ5 609 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 C11orf84Q9BUA3 381 aaPredicted RBP22.26■■□□□ 1.15
VPS16-207ENST00000481812 FAM124BQ9H5Z6 455 aaPredicted RBP22.26■■□□□ 1.15
VPS16-207ENST00000481812 PLXNA4Q9HCM2 1894 aa22.26■■□□□ 1.15
VPS16-207ENST00000481812 A0A1W2PQC6 194 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 F8W810 466 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 SYN3O14994 580 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 IGFBP6P24592 240 aaPredicted RBP22.25■■□□□ 1.15
VPS16-207ENST00000481812 PON1P27169 355 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 WDR72Q3MJ13 1102 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 TRIM65Q6PJ69 517 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 GPR65Q8IYL9 337 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 KLHL23Q8NBE8 558 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 FAM81BQ96LP2 452 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 NT5C1BQ96P26 610 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 CRACR2AQ9BSW2 395 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 INTS2Q9H0H0 1204 aaKnown RBP22.25■■□□□ 1.15
VPS16-207ENST00000481812 IFNKQ9P0W0 207 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 DAAM1Q9Y4D1 1078 aa22.25■■□□□ 1.15
VPS16-207ENST00000481812 VWA8A3KMH1 1905 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 TEX33O43247 280 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 CYP11A1P05108 521 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 TYMPP19971 482 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 BRCC3P46736 316 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 DSTYKQ6XUX3 929 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 TOP6BLQ8N6T0 577 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 HASPINQ8TF76 798 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 PI4K2AQ9BTU6 479 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 GPR62Q9BZJ7 368 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 APOBEC3GQ9HC16 384 aaKnown RBP22.24■■□□□ 1.15
VPS16-207ENST00000481812 PLCB1Q9NQ66 1216 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 PUF60Q9UHX1 559 aaKnown RBP22.24■■□□□ 1.15
VPS16-207ENST00000481812 DSEQ9UL01 958 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 PCDHB8Q9UN66 801 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 SIK3Q9Y2K2 1263 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 SNX9Q9Y5X1 595 aa22.24■■□□□ 1.15
VPS16-207ENST00000481812 CHD9Q3L8U1 2897 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 H3BNC9 293 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 CYB561D2O14569 222 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 HUS1O60921 280 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 LRRN2O75325 713 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 SOD2P04179 222 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 ODC1P11926 461 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 SLC9A1P19634 815 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 FGFR3P22607 806 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 TNNC1P63316 161 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 USP41Q3LFD5 358 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.23■■□□□ 1.15
VPS16-207ENST00000481812 TMEM86AQ8N2M4 240 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 FBXO22Q8NEZ5 403 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 HERC2P3Q9BVR0 1158 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 BCO2Q9BYV7 579 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 NIF3L1Q9GZT8 377 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 CYP3A43Q9HB55 503 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 CHST7Q9NS84 486 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 LAMA3Q16787 3333 aa22.23■■□□□ 1.15
VPS16-207ENST00000481812 TACC1O75410 805 aa22.22■■□□□ 1.15
VPS16-207ENST00000481812 TBXAS1P24557 533 aaPredicted RBP22.22■■□□□ 1.15
VPS16-207ENST00000481812 GCNT1Q02742 428 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms