RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 CNGA1P29973 690 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 QARSP47897 775 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 SLC1A5Q15758 541 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 TATDN1Q6P1N9 297 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 SV2AQ7L0J3 742 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 ANKMY2Q8IV38 441 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 C12orf56Q8IXR9 622 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 TAB3Q8N5C8 712 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 MCUR1Q96AQ8 359 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 FHDC1Q9C0D6 1143 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 TDRD3Q9H7E2 651 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 KCNH7Q9NS40 1196 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 DPPA5A6NC42 116 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 VIL1P09327 827 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 GM2AP17900 193 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 KRT4P19013 534 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 HOXA10P31260 410 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 YWHABP31946 246 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 CCNG1P51959 295 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 TAS2R40P59535 323 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 JAG1P78504 1218 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 MRPS35P82673 323 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 KLC1Q07866 573 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 PDIA2Q13087 525 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 WDR44Q5JSH3 913 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 THEMIS2Q5TEJ8 643 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 ACER1Q8TDN7 264 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 DDX1Q92499 740 aaKnown RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 RIT2Q99578 217 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 SH3GL3Q99963 347 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 DENND2DQ9H6A0 471 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-211ENST00000481804 SENP1Q9P0U3 644 aa15.18■□□□□ 0.02
CCDC78-211ENST00000481804 DENND3A2RUS2 1198 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 CFAP69A5D8W1 941 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 GOLGA8RI6L899 631 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 LINGO3P0C6S8 592 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 GPC3P51654 580 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 NOP14P78316 857 aaKnown RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 MOGSQ13724 837 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 TMEM154Q6P9G4 183 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 VPS52Q8N1B4 723 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 MXRA8Q9BRK3 442 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 ALG13Q9NP73 1137 aaKnown RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 BTAF1O14981 1849 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 A0A1W2PPM1 405 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 E7ENQ6 273 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 HNRNPDLO14979 420 aaKnown RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 ABHD2P08910 425 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 ETS1P14921 441 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 GNAZP19086 355 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 ATP6V1C1P21283 382 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 GTF2BQ00403 316 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 DMP1Q13316 513 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 PLA2G4FQ68DD2 849 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 ANO7Q6IWH7 933 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 OTOAQ7RTW8 1153 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 SCYL3Q8IZE3 742 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 CHURC1Q8WUH1 139 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 AVENQ9NQS1 362 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 STOML1Q9UBI4 398 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 DNPEPQ9ULA0 475 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 SGK1O00141 431 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 TLR3O15455 904 aaKnown RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 PIAS1O75925 651 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 KRT1P04264 644 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 FDX1P10109 184 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 MAPTP10636 758 aaKnown RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 PTPN4P29074 926 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 MTM1Q13496 603 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 WASHC2DQ5SRD0 308 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 CENPUQ71F23 418 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 GLIS1Q8NBF1 620 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 ZNF75CPQ92670 426 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 STMN2Q93045 179 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 SLC7A6OSQ96CW6 309 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 FOXP3Q9BZS1 431 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 MRPL47Q9HD33 250 aaKnown RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 KMT5AQ9NQR1 393 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-211ENST00000481804 LRRC42Q9Y546 428 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 PCDHB2Q9Y5E7 798 aa15.17■□□□□ 0.02
CCDC78-211ENST00000481804 NVLO15381 856 aaKnown RBP15.16■□□□□ 0.02
CCDC78-211ENST00000481804 PSTPIP1O43586 416 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 ITGB5P18084 799 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 TNNI1P19237 187 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 BIRC2Q13490 618 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 ZRSR2Q15696 482 aaKnown RBP15.16■□□□□ 0.02
CCDC78-211ENST00000481804 KLF6Q99612 283 aaPredicted RBP15.16■□□□□ 0.02
CCDC78-211ENST00000481804 FAM213AQ9BRX8 229 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 VCXQ9H320 206 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 DCLRE1BQ9H816 532 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 DLGAP2Q9P1A6 1054 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 PSMC3IPQ9P2W1 217 aaPredicted RBP15.16■□□□□ 0.02
CCDC78-211ENST00000481804 TBX20Q9UMR3 447 aa15.16■□□□□ 0.02
CCDC78-211ENST00000481804 DNALI1O14645 258 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms