RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 ANAPC15P60006 121 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 IGBP1P78318 339 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 FSCN1Q16658 493 aaKnown RBP8.14□□□□□ -1.11
CBX3-206ENST00000481057 BORAQ6PGQ7 559 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 KBTBD2Q8IY47 623 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 LMBR1Q8WVP7 490 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 HERVK_113Q902F9 699 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 PRRX2Q99811 253 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 KIAA1683Q9H0B3 1180 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 PARD6AQ9NPB6 346 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 TMPRSS11EQ9UL52 423 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 COG5Q9UP83 839 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 NUMBLQ9Y6R0 609 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 CACNA1HO95180 2353 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 LTBP2Q14767 1821 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 DNAH12Q6ZR08 3092 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 OTOL1A6NHN0 477 aaPredicted RBP8.13□□□□□ -1.11
CBX3-206ENST00000481057 WNT10BO00744 389 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 PPM1GO15355 546 aaPredicted RBP8.13□□□□□ -1.11
CBX3-206ENST00000481057 KATNA1O75449 491 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 ENPP1P22413 925 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 RRADP55042 308 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 MTMR1Q13613 665 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 PCOLCEQ15113 449 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 AMOTQ4VCS5 1084 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 CT83Q5H943 113 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 PITRM1Q5JRX3 1037 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 ANKRD13AQ8IZ07 590 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 LGI4Q8N135 537 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 ATOH1Q92858 354 aaPredicted RBP8.13□□□□□ -1.11
CBX3-206ENST00000481057 BADQ92934 168 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 RMDN1Q96DB5 314 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 DYDC2Q96IM9 177 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 NOL10Q9BSC4 688 aaKnown RBP8.13□□□□□ -1.11
CBX3-206ENST00000481057 MENTQ9BUN1 341 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 NYXQ9GZU5 481 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 HOMER2Q9NSB8 354 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 PCDHB6Q9Y5E3 794 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 COL4A6Q14031 1691 aa8.13□□□□□ -1.11
CBX3-206ENST00000481057 GVINP1Q7Z2Y8 2422 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 GCN1Q92616 2671 aaKnown RBP8.12□□□□□ -1.11
CBX3-206ENST00000481057 ABCC4O15439 1325 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 GOLGA8AA7E2F4 631 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 GOLGA8BA8MQT2 603 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 DCXO43602 365 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 BBOX1O75936 387 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 CELA3BP08861 270 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 MEOX1P50221 254 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 SCAND1P57086 179 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 AGBL4Q5VU57 503 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 LYSMD2Q8IV50 215 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 CDYL2Q8N8U2 506 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 NKD2Q969F2 451 aaPredicted RBP8.12□□□□□ -1.11
CBX3-206ENST00000481057 HIST1H2AHQ96KK5 128 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 HIST1H2AJQ99878 128 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 ZCCHC17Q9NP64 241 aaKnown RBP8.12□□□□□ -1.11
CBX3-206ENST00000481057 VWA7Q9Y334 891 aa8.12□□□□□ -1.11
CBX3-206ENST00000481057 DUOX1Q9NRD9 1551 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 PRR23AA6NEV1 266 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 CYSRT1A8MQ03 144 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 BTBD19C9JJ37 291 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 PROB1E7EW31 1015 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 KLF1Q13351 362 aaPredicted RBP8.11□□□□□ -1.11
CBX3-206ENST00000481057 TRIM25Q14258 630 aaKnown RBP8.11□□□□□ -1.11
CBX3-206ENST00000481057 UGT8Q16880 541 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 ZMAT1Q5H9K5 638 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 KLHDC10Q6PID8 442 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 FRMD5Q7Z6J6 570 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 PLEKHH3Q7Z736 793 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 APOBEC3FQ8IUX4 373 aaKnown RBP8.11□□□□□ -1.11
CBX3-206ENST00000481057 SLC41A1Q8IVJ1 513 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 ZDHHC14Q8IZN3 488 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 EAF2Q96CJ1 260 aaPredicted RBP8.11□□□□□ -1.11
CBX3-206ENST00000481057 MTMR8Q96EF0 704 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 TEX13AQ9BXU3 409 aaPredicted RBP8.11□□□□□ -1.11
CBX3-206ENST00000481057 KCTD10Q9H3F6 313 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 DNAI1Q9UI46 699 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 TRHDEQ9UKU6 1024 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 SLC4A7Q9Y6M7 1214 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 DUSP10Q9Y6W6 482 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 CHD9Q3L8U1 2897 aa8.11□□□□□ -1.11
CBX3-206ENST00000481057 SCN9AQ15858 1988 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 A0A0A6YYK5 440 aaPredicted RBP8.1□□□□□ -1.11
CBX3-206ENST00000481057 LPLP06858 475 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 GPR15P49685 360 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 PPARAQ07869 468 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 ITKQ08881 620 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 FZD5Q13467 585 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.1□□□□□ -1.11
CBX3-206ENST00000481057 SYDE2Q5VT97 1194 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 CBARPQ8N350 705 aaPredicted RBP8.1□□□□□ -1.11
CBX3-206ENST00000481057 TGFBRAP1Q8WUH2 860 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 RSAD2Q8WXG1 361 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 WDR92Q96MX6 357 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 SOX7Q9BT81 388 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.1□□□□□ -1.11
CBX3-206ENST00000481057 PRSS50Q9UI38 385 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 SYNPO2Q9UMS6 1093 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 USP18Q9UMW8 372 aa8.1□□□□□ -1.11
CBX3-206ENST00000481057 INVSQ9Y283 1065 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms