RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 TISP43B9A030 160 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 B9A039 149 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 IPO5O00410 1097 aaKnown RBP4.29□□□□□ -1.72
UBE2F-221ENST00000480828 BTN3A1O00481 513 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 PODXLO00592 558 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 SNX2O60749 519 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 RNASEH2AO75792 299 aaKnown RBP4.29□□□□□ -1.72
UBE2F-221ENST00000480828 FSBPO95073 299 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 TNFRSF6BO95407 300 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 MATN4O95460 622 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 NDST3O95803 873 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 MT-ND5P03915 603 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 MYL4P12829 197 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 NCAM1P13591 858 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 CNTFP26441 200 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 GUCY1A2P33402 732 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 DDIT3P35638 169 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 CASP2P42575 452 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 KCNJ5P48544 419 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 ITGA1P56199 1179 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 EFEMP1Q12805 493 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 SLC13A2Q13183 592 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 TAF12Q16514 161 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 MAN2A1Q16706 1144 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 C19orf54Q5BKX5 351 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 TMEM200BQ69YZ2 307 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 KRBA2Q6ZNG9 492 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 UNC13DQ70J99 1090 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 RSRC2Q7L4I2 434 aaKnown RBP4.29□□□□□ -1.72
UBE2F-221ENST00000480828 MICU3Q86XE3 530 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 TRMT2AQ8IZ69 625 aaKnown RBP4.29□□□□□ -1.72
UBE2F-221ENST00000480828 TMTC2Q8N394 836 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 FANCBQ8NB91 859 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 NAXEQ8NCW5 288 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 KBTBD7Q8WVZ9 684 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 CPA5Q8WXQ8 436 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 TRIM43Q96BQ3 446 aaPredicted RBP4.29□□□□□ -1.72
UBE2F-221ENST00000480828 NMD3Q96D46 503 aaKnown RBP4.29□□□□□ -1.72
UBE2F-221ENST00000480828 CYFIP2Q96F07 1278 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 LRRC46Q96FV0 321 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 PPM1MQ96MI6 270 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 UIMC1Q96RL1 719 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 TMEM209Q96SK2 561 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 SPATA25Q9BR10 227 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 SMC4Q9NTJ3 1288 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 SPATA6Q9NWH7 488 aaPredicted RBP4.29□□□□□ -1.72
UBE2F-221ENST00000480828 Q9UFV3 132 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 CROTQ9UKG9 612 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 GJD2Q9UKL4 321 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 ITGB1BP2Q9UKP3 347 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 PMF1-BGLAPU3KQ54 211 aa4.29□□□□□ -1.72
UBE2F-221ENST00000480828 SYT5O00445 386 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ITGA10O75578 1167 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ALDH1A2O94788 518 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 MBD4O95243 580 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 CNOT4O95628 575 aaKnown RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ABHD16AO95870 558 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 POLBP06746 335 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ANXA2P07355 339 aaKnown RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 SBK3P0C264 359 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 FTH1P19P0C7X4 201 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 CKMT1AP12532 417 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 IL1R1P14778 569 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 PTPN7P35236 360 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 SERPINF1P36955 418 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ALDH1A3P47895 512 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 KCNC1P48547 511 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 PIK3CGP48736 1102 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 KCNQ1P51787 676 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ARL4CP56559 192 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 CTXN1P60606 82 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 CREMQ03060 361 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 CACNB2Q08289 660 aaPredicted RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 CNGB1Q14028 1251 aaPredicted RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 SPARCL1Q14515 664 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 HYIQ5T013 277 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 L1TD1Q5T7N2 865 aaKnown RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 FAM180BQ6P0A1 224 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 FBXO38Q6PIJ6 1188 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 DPP8Q6V1X1 898 aaPredicted RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ZNF783Q6ZMS7 281 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 RFX8Q6ZV50 586 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 BEND5Q7L4P6 421 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 CXXC5Q7LFL8 322 aaKnown RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 TAS1R1Q7RTX1 841 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 STYXQ8WUJ0 223 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 RILPL2Q969X0 211 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 GORASP1Q9BQQ3 440 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 FAM167BQ9BTA0 163 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 DPH1Q9BZG8 443 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 TBC1D23Q9NUY8 699 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 TMEM140Q9NV12 185 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 ING3Q9NXR8 418 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 GPRC5DQ9NZD1 345 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 IGSF9Q9P2J2 1179 aa4.28□□□□□ -1.72
UBE2F-221ENST00000480828 SCAF8Q9UPN6 1271 aaKnown RBP4.28□□□□□ -1.72
UBE2F-221ENST00000480828 PRSS29PA6NIE9 313 aa4.27□□□□□ -1.73
UBE2F-221ENST00000480828 PIP5K1BO14986 540 aa4.27□□□□□ -1.73
UBE2F-221ENST00000480828 GRM6O15303 877 aa4.27□□□□□ -1.73
UBE2F-221ENST00000480828 IRAK2O43187 625 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms