RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 PDIA5Q14554 519 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
GCA-208ENST00000479199 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 FAM184AQ8NB25 1140 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 SHKBP1Q8TBC3 707 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 FAM3CQ92520 227 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 IRF7Q92985 503 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
GCA-208ENST00000479199 RSPRY1Q96DX4 576 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 ZNF512Q96ME7 567 aaPredicted RBP13.1□□□□□ -0.31
GCA-208ENST00000479199 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
GCA-208ENST00000479199 CNOT1A5YKK6 2376 aaKnown RBP13.09□□□□□ -0.31
GCA-208ENST00000479199 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 ARNTLO00327 626 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 TOM1L1O75674 476 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 TGM1P22735 817 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 GUCY2FP51841 1108 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 ATXN1P54253 815 aaKnown RBP13.09□□□□□ -0.31
GCA-208ENST00000479199 HMGN5P82970 282 aaKnown RBP13.09□□□□□ -0.31
GCA-208ENST00000479199 LMNB2Q03252 620 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 STRN3Q13033 797 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 TMEM161BQ8NDZ6 487 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 FAM126AQ9BYI3 521 aaPredicted RBP13.09□□□□□ -0.31
GCA-208ENST00000479199 HAPLN2Q9GZV7 340 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 CRISPLD1Q9H336 500 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 SLITRK6Q9H5Y7 841 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 GMEB2Q9UKD1 530 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
GCA-208ENST00000479199 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
GCA-208ENST00000479199 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
GCA-208ENST00000479199 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
GCA-208ENST00000479199 A0A1W2PRU2 124 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 M0QZQ0 153 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 ZNF263O14978 683 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 MAPTP10636 758 aaKnown RBP13.08□□□□□ -0.32
GCA-208ENST00000479199 PLS3P13797 630 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 CCNE1P24864 410 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 GUCY2CP25092 1073 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 U2AF2P26368 475 aaKnown RBP eCLIP13.08□□□□□ -0.325e-6■■■□□ 16.5
GCA-208ENST00000479199 TNFSF9P41273 254 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.323e-6■■■■□ 22.8
GCA-208ENST00000479199 SOX9P48436 509 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 SATB1Q01826 763 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
GCA-208ENST00000479199 STXBP5Q5T5C0 1151 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 TMC8Q8IU68 726 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 GPIHBP1Q8IV16 184 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 TTC9BQ8N6N2 239 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 GPR161Q8N6U8 529 aaKnown RBP13.08□□□□□ -0.32
GCA-208ENST00000479199 LEMD2Q8NC56 503 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 BEST2Q8NFU1 509 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 PNMA5Q96PV4 448 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 PLIN2Q99541 437 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 LRRC3Q9BY71 257 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 C17orf75Q9HAS0 396 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 LMAN1LQ9HAT1 526 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 TRPV4Q9HBA0 871 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 TRPV5Q9NQA5 729 aa13.08□□□□□ -0.32
GCA-208ENST00000479199 KMT2BQ9UMN6 2715 aaPredicted RBP13.07□□□□□ -0.32
GCA-208ENST00000479199 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 SLC38A8A6NNN8 435 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 LAD1O00515 517 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 PPEF2O14830 753 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 NEFLP07196 543 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 CHRNB1P11230 501 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 MARCKSP29966 332 aaPredicted RBP13.07□□□□□ -0.32
GCA-208ENST00000479199 LRPAP1P30533 357 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 PRPHP41219 470 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 CCR3P51677 355 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 MCL1Q07820 350 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 DMWDQ09019 674 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 SPEM2Q0P670 501 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 GAS6Q14393 721 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 WDR44Q5JSH3 913 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 ZPBP2Q6X784 338 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 PRR23BQ6ZRT6 265 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 MFSD6LQ8IWD5 586 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 SPIRE2Q8WWL2 714 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 IER2Q9BTL4 223 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 TIPINQ9BVW5 301 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 CNTNAP3Q9BZ76 1288 aa13.07□□□□□ -0.32
GCA-208ENST00000479199 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.07□□□□□ -0.32
GCA-208ENST00000479199 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
GCA-208ENST00000479199 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 HELZP42694 1942 aaKnown RBP13.06□□□□□ -0.32
GCA-208ENST00000479199 ANAPC1Q9H1A4 1944 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 TTC26A0AVF1 554 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 DCDC2BA2VCK2 349 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 PRR5-ARHGAP8B1AHC4 643 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 CLDN3O15551 220 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 SOAT2O75908 522 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 OAZ2O95190 189 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms