RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 ADAM7Q9H2U9 754 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 DSEQ9UL01 958 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 BDP1A6H8Y1 2624 aa16.72■□□□□ 0.27
C9orf3-217ENST00000479161 NR3C1P04150 777 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 POU2F2P09086 479 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
C9orf3-217ENST00000479161 CA8P35219 290 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 TAF6P49848 677 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 CYP2J2P51589 502 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 WNT7BP56706 349 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 VARS2Q5ST30 1063 aaKnown RBP16.71■□□□□ 0.27
C9orf3-217ENST00000479161 USP37Q86T82 979 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 CEP57Q86XR8 500 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 C1orf127Q8N9H9 656 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 TRIML1Q8N9V2 468 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 TMC2Q8TDI7 906 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 ANKRD36BP1Q96IX9 119 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 B3GALT6Q96L58 329 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 ZNF560Q96MR9 790 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 NECTIN4Q96NY8 510 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 FNBP1Q96RU3 617 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 MKNK1Q9BUB5 465 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 SFXN1Q9H9B4 322 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 ZDHHC7Q9NXF8 308 aa16.71■□□□□ 0.27
C9orf3-217ENST00000479161 BARX2Q9UMQ3 279 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-217ENST00000479161 IKBKBO14920 756 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 TGM5O43548 720 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 ABLIM3O94929 683 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 FAM163BP0C2L3 166 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 EPCAMP16422 314 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 HOXA9P31269 272 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 KCNQ1P51787 676 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 RBP5P82980 135 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 TFAMQ00059 246 aaKnown RBP16.7■□□□□ 0.26
C9orf3-217ENST00000479161 SV2CQ496J9 727 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 CES5AQ6NT32 575 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-217ENST00000479161 EP400NLQ6ZTU2 488 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 ADSSL1Q8N142 457 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 ZNF461Q8TAF7 563 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 PARD3BQ8TEW8 1205 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 SENP8Q96LD8 212 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 CGRRF1Q99675 332 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 GDAP2Q9NXN4 497 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 FRMD4BQ9Y2L6 1034 aa16.7■□□□□ 0.26
C9orf3-217ENST00000479161 KPNA7A9QM74 516 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 STAU1O95793 577 aaKnown RBP16.69■□□□□ 0.26
C9orf3-217ENST00000479161 TNNC2P02585 160 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 ODC1P11926 461 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 PRCPP42785 496 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 MTHFRP42898 656 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 GUCY2FP51841 1108 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 RBM10P98175 930 aaKnown RBP16.69■□□□□ 0.26
C9orf3-217ENST00000479161 YWHAHQ04917 246 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-217ENST00000479161 LRRC63Q05C16 580 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 STIM1Q13586 685 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 ZNF280DQ6N043 979 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 DSTYKQ6XUX3 929 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 ZC3H3Q8IXZ2 948 aaKnown RBP16.69■□□□□ 0.26
C9orf3-217ENST00000479161 DHTKD1Q96HY7 919 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-217ENST00000479161 GZF1Q9H116 711 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-217ENST00000479161 FBXW11Q9UKB1 542 aa16.69■□□□□ 0.26
C9orf3-217ENST00000479161 C5orf42Q9H799 3197 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 OR6C75A6NL08 312 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 I3L4J1 428 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 PPEF2O14830 753 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 SPTLC1O15269 473 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 ITGB3P05106 788 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 HNRNPA1P09651 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
C9orf3-217ENST00000479161 NR2F2P24468 414 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 OR1D2P34982 312 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 MORC3Q14149 939 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 LLGL2Q6P1M3 1020 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 INTS8Q75QN2 995 aaKnown RBP16.68■□□□□ 0.26
C9orf3-217ENST00000479161 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 GPR149Q86SP6 731 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 RDH13Q8NBN7 331 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 RIPOR3Q96MK2 946 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 POP1Q99575 1024 aaKnown RBP16.68■□□□□ 0.26
C9orf3-217ENST00000479161 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 VRTNQ9H8Y1 702 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 LMBRD1Q9NUN5 540 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 KIAA1468Q9P260 1216 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 HSFX1Q9UBD0 423 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 SIX4Q9UIU6 781 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 FBXL5Q9UKA1 691 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 MAN1B1Q9UKM7 699 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 AGAP1Q9UPQ3 857 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 USP15Q9Y4E8 981 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-217ENST00000479161 CDY1Q9Y6F8 540 aa16.68■□□□□ 0.26
C9orf3-217ENST00000479161 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 GOLGA6L22H0YM25 854 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 PSMA7O14818 248 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms