RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
SRRT-211ENST00000478693 PDCD11Q14690 1871 aaKnown RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 SYCE3A1L190 88 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 FSD2A1L4K1 749 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 C2orf71A6NGG8 1288 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 KPNA7A9QM74 516 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 H7C4K7 107 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 PIRO00625 290 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 CYB561D2O14569 222 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 SYN3O14994 580 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 ADH1AP07327 375 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 FGFR3P22607 806 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 KLRC2P26717 231 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 NDUFV1P49821 464 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 MXI1P50539 228 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 LILRA4P59901 499 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 TNNC1P63316 161 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 YWHAHQ04917 246 aaPredicted RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 ZNF699Q32M78 642 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 TDRD10Q5VZ19 366 aaKnown RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 LLGL2Q6P1M3 1020 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 CD300LGQ6UXG3 332 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 C11orf57Q6ZUT1 292 aaPredicted RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 ANKS3Q6ZW76 656 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 MRPL43Q8N983 215 aaKnown RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 CCDC150Q8NCX0 1101 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 HPDLQ96IR7 371 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 SENP8Q96LD8 212 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 CNOT6LQ96LI5 555 aaKnown RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 CDCA3Q99618 268 aaPredicted RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 NAT10Q9H0A0 1025 aaKnown RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 DNAJC25Q9H1X3 360 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 TMEM8AQ9HCN3 771 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 SIX4Q9UIU6 781 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 DSEQ9UL01 958 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 TIMM13Q9Y5L4 95 aaPredicted RBP12.25□□□□□ -0.45
SRRT-211ENST00000478693 SNX9Q9Y5X1 595 aa12.25□□□□□ -0.45
SRRT-211ENST00000478693 IKBKBO14920 756 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 SPTLC1O15269 473 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 HUS1O60921 280 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 RPL17P18621 184 aaKnown RBP12.24□□□□□ -0.45
SRRT-211ENST00000478693 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.45
SRRT-211ENST00000478693 MTIF2P46199 727 aaKnown RBP12.24□□□□□ -0.45
SRRT-211ENST00000478693 AARSP49588 968 aaKnown RBP eCLIP12.24□□□□□ -0.45
SRRT-211ENST00000478693 ARPP19P56211 112 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 ENPEPQ07075 957 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 HYAL1Q12794 435 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 NCOA4Q13772 614 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 CTXN3Q4LDR2 81 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 CT47A1Q5JQC4 288 aaPredicted RBP12.24□□□□□ -0.45
SRRT-211ENST00000478693 VARS2Q5ST30 1063 aaKnown RBP12.24□□□□□ -0.45
SRRT-211ENST00000478693 KRT39Q6A163 491 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 OVOS1Q6IE37 1185 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 FRMD5Q7Z6J6 570 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 PPFIBP1Q86W92 1011 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 PIK3R5Q8WYR1 880 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 ZNF516Q92618 1163 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 KLHL5Q96PQ7 755 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 MMS19Q96T76 1030 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 GZF1Q9H116 711 aaPredicted RBP12.24□□□□□ -0.45
SRRT-211ENST00000478693 CHST7Q9NS84 486 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 CLDND1Q9NY35 253 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 IRAK3Q9Y616 596 aa12.24□□□□□ -0.45
SRRT-211ENST00000478693 ANK1P16157 1881 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 M0QZQ0 153 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 N4BP1O75113 896 aaKnown RBP12.23□□□□□ -0.45
SRRT-211ENST00000478693 CLASP2O75122 1294 aaKnown RBP12.23□□□□□ -0.45
SRRT-211ENST00000478693 EFEMP2O95967 443 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 GLUD1P00367 558 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 HLA-DRAP01903 254 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 C4BPAP04003 597 aaKnown RBP12.23□□□□□ -0.45
SRRT-211ENST00000478693 CNPP09543 421 aaKnown RBP12.23□□□□□ -0.45
SRRT-211ENST00000478693 P4HA1P13674 534 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 CPB1P15086 417 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 TYMPP19971 482 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 ATICP31939 592 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 GTF2H1P32780 548 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 MYL6P60660 151 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 CLDN10P78369 228 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 MYL7Q01449 175 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 CETN1Q12798 172 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 DUSP6Q16828 381 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 ZACNQ401N2 412 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 ANO6Q4KMQ2 910 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 HSP90AA4PQ58FG1 418 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 KIAA0319Q5VV43 1072 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 ELMSAN1Q6PJG2 1045 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 SCARA5Q6ZMJ2 495 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 SV2AQ7L0J3 742 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 LNX1Q8TBB1 728 aaPredicted RBP12.23□□□□□ -0.45
SRRT-211ENST00000478693 THAP9Q9H5L6 903 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.23□□□□□ -0.454e-12■■■■■ 83.8
SRRT-211ENST00000478693 FNIP2Q9P278 1114 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 MTRRQ9UBK8 725 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
SRRT-211ENST00000478693 NFE2L3Q9Y4A8 694 aa12.23□□□□□ -0.45
SRRT-211ENST00000478693 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms