RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 AFG1LQ8WV93 481 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 RNF34Q969K3 372 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 FTOQ9C0B1 505 aaKnown RBP eCLIP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 NAPBQ9H115 298 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 UBE2ZQ9H832 354 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 TNFRSF12AQ9NP84 129 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 MTUS1Q9ULD2 1270 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 COG5Q9UP83 839 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 FNDC1Q4ZHG4 1894 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 LOC102724159A0A0B4J2E5 919 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 A0A0D9SFI3 127 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 TSPY2A6NKD2 308 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 TNFRSF10CO14798 259 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 GJB5O95377 273 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 FGAP02671 866 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
CKS1B-207ENST00000477676 MMP3P08254 477 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 SUPT20HL2P0C7V6 817 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 MSL3P1P0C860 447 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 TXNP10599 105 aaKnown RBP5.36□□□□□ -1.55
CKS1B-207ENST00000477676 CKBP12277 381 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 POLR2BP30876 1174 aaKnown RBP5.36□□□□□ -1.55
CKS1B-207ENST00000477676 ERVK-21P61565 698 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 RBL2Q08999 1139 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF543Q08ER8 600 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 PPP2R5BQ15173 497 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 PWP2Q15269 919 aaKnown RBP5.36□□□□□ -1.55
CKS1B-207ENST00000477676 ALX1Q15699 326 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 AAK1Q2M2I8 961 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 CCDC96Q2M329 555 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 PAQR3Q6TCH7 311 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 RNF207Q6ZRF8 634 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF589Q86UQ0 364 aaPredicted RBP5.36□□□□□ -1.55
CKS1B-207ENST00000477676 CABP7Q86V35 215 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 SESTD1Q86VW0 696 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 TBC1D10CQ8IV04 446 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 AFAP1L1Q8TED9 768 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 SCFD2Q8WU76 684 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 FAM227BQ96M60 508 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 TAAR1Q96RJ0 339 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 C17orf80Q9BSJ5 609 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 BCAS3Q9H6U6 928 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF287Q9HBT7 754 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 AP5S1Q9NUS5 200 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 ERVK13-1Q9NX77 482 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 HDAC6Q9UBN7 1215 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 ADD3Q9UEY8 706 aaKnown RBP5.36□□□□□ -1.55
CKS1B-207ENST00000477676 SF3B6Q9Y3B4 125 aaKnown RBP5.36□□□□□ -1.55
CKS1B-207ENST00000477676 PLXNA3P51805 1871 aa5.36□□□□□ -1.55
CKS1B-207ENST00000477676 GVINP1Q7Z2Y8 2422 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 TTC41PQ6P2S7 1318 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 WDR19Q8NEZ3 1342 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 MEIS3P2A8K0S8 358 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 HAS3O00219 553 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 NKRFO15226 690 aaKnown RBP eCLIP5.35□□□□□ -1.55
CKS1B-207ENST00000477676 NOBOXO60393 691 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 BAIAP3O94812 1187 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 SLPIP03973 132 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 CYBBP04839 570 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 GSTM1P09488 218 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 LINC00271P0C7V0 271 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF286BP0CG31 522 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 GOLGA8HP0CJ92 632 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 TOP1P11387 765 aaKnown RBP5.35□□□□□ -1.55
CKS1B-207ENST00000477676 ACTN1P12814 892 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF20P17024 532 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 LTBRP36941 435 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 HAND2P61296 217 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 HTRA4P83105 476 aaPredicted RBP5.35□□□□□ -1.55
CKS1B-207ENST00000477676 SP2Q02086 613 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 BFSP2Q13515 415 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 SLC35G1Q2M3R5 365 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 LEXMQ3ZCV2 418 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 PLEKHN1Q494U1 663 aaPredicted RBP5.35□□□□□ -1.55
CKS1B-207ENST00000477676 USH1GQ495M9 461 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF618Q5T7W0 954 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 SEPT14Q6ZU15 432 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 LRRC8DQ7L1W4 858 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 CHST3Q7LGC8 479 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 DNERQ8NFT8 737 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 IL31RAQ8NI17 732 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 NEK9Q8TD19 979 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 RAD9AQ99638 391 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 FSD1Q9BTV5 496 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 NT5C1AQ9BXI3 368 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 C1QTNF3Q9BXJ4 246 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 NACAP1Q9BZK3 213 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 UBA5Q9GZZ9 404 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 TCP11L1Q9NUJ3 509 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 IMPACTQ9P2X3 320 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 SUCOQ9UBS9 1254 aaKnown RBP5.35□□□□□ -1.55
CKS1B-207ENST00000477676 DDX41Q9UJV9 622 aaKnown RBP5.35□□□□□ -1.55
CKS1B-207ENST00000477676 RCAN3Q9UKA8 241 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 TELO2Q9Y4R8 837 aa5.35□□□□□ -1.55
CKS1B-207ENST00000477676 EP300Q09472 2414 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 NEDD4P46934 1319 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 KIF28PB7ZC32 967 aa5.34□□□□□ -1.55
CKS1B-207ENST00000477676 H3BQ06 376 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-207ENST00000477676 KPNA6O60684 536 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms