RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 PTPRN2Q92932 1015 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 GRAMD1AQ96CP6 724 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 CRELD1Q96HD1 420 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 CATSPER2Q96P56 530 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ZIM3Q96PE6 472 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 GBP5Q96PP8 586 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 TMEM237Q96Q45 408 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 CDC5LQ99459 802 aaKnown RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 CENPKQ9BS16 269 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 TIPINQ9BVW5 301 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 BRD8Q9H0E9 1235 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 GDF3Q9NR23 364 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ARHGEF3Q9NR81 526 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ABHD10Q9NUJ1 306 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 GALNT8Q9NY28 637 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ADD3Q9UEY8 706 aaKnown RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 SLC12A6Q9UHW9 1150 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 SNX12Q9UMY4 172 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 SSX2IPQ9Y2D8 614 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 SH3GLB1Q9Y371 365 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 NFE2L3Q9Y4A8 694 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 HYOU1Q9Y4L1 999 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 NR2E3Q9Y5X4 410 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 KDM3BQ7LBC6 1761 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 N4BP2Q86UW6 1770 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 RGPD3A6NKT7 1758 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 RGPD4Q7Z3J3 1758 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CASZ1Q86V15 1759 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 UBR2Q8IWV8 1755 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 NEDD4P46934 1319 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 MROH7Q68CQ1 1323 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 WDR19Q8NEZ3 1342 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 SALL1Q9NSC2 1324 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 A0A1B0GTL3 188 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 A0A1B0GVL5 298 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 DPPA5A6NC42 116 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 TMEM110-MUSTN1A8MSY1 372 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 FADS2P1A8MWK0 482 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 NUDT19A8MXV4 375 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 M0R2C6 588 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ELL2O00472 640 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 KCNQ3O43525 872 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PFDN1O60925 122 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ATP6V1G1O75348 118 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 SUN1O94901 812 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CHGBP05060 677 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 SSBP05455 408 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CLTAP09496 248 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 IFIT2P09913 472 aaKnown RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 FAM200BP0CF97 657 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 EIF4BP23588 611 aaKnown RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 POLD1P28340 1107 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PPP1R2P41236 205 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 NEK2P51955 445 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 RPL26P61254 145 aaKnown RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ZBED6P86452 979 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PDE1BQ01064 536 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 RBL2Q08999 1139 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 KRT72Q14CN4 511 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CLUL1Q15846 466 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 INAQ16352 499 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ACCSLQ4AC99 568 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CFAP221Q4G0U5 840 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 HSF5Q4G112 596 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC122Q5T0U0 273 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 UBXN11Q5T124 520 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ERMARDQ5T6L9 678 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 SFMBT2Q5VUG0 894 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 RESP18Q5W5W9 173 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 C8orf74Q6P047 294 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 BNC2Q6ZN30 1099 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 Q6ZUG5 572 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PTF1AQ7RTS3 328 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 TMEM110Q86TL2 294 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PNMA8AQ86V59 439 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 RAB11FIP4Q86YS3 637 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PASD1Q8IV76 773 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CROCCP3Q8IVE0 287 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 NME8Q8N427 588 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ENDOVQ8N8Q3 282 aaKnown RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ATP11CQ8NB49 1132 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 RBBP8NLQ8NC74 664 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 DAGLBQ8NCG7 672 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 LINC00116Q8NCU8 138 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 SPATA4Q8NEY3 305 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 PPP1R14CQ8TAE6 165 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 AGAP11Q8TF27 550 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 ARL8AQ96BM9 186 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 FAM81BQ96LP2 452 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC74BQ96LY2 380 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 HAPLN3Q96S86 360 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 MMS19Q96T76 1030 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 SEC62Q99442 399 aaKnown RBP5.07□□□□□ -1.6
PTCD3-212ENST00000477520 NDNQ99608 321 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 DESI2Q9BSY9 194 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 TUBB6Q9BUF5 446 aa5.07□□□□□ -1.6
PTCD3-212ENST00000477520 EPB41L1Q9H4G0 881 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms