RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ZRSR1Q15695 479 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 CSRP2Q16527 193 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 SEZ6Q53EL9 994 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TPGS2Q68CL5 300 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 CD300LGQ6UXG3 332 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 Q6ZS52 159 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 HAUS6Q7Z4H7 955 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 USP37Q86T82 979 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 LONP2Q86WA8 852 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 MFSD6LQ8IWD5 586 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 SPEM1Q8N4L4 309 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 FAM160A2Q8N612 972 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 LEMD2Q8NC56 503 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TTC16Q8NEE8 873 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 APPL2Q8NEU8 664 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 DDX12PQ92771 950 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 GTF3C6Q969F1 213 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 ZFYVE19Q96K21 471 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 ZMAT2Q96NC0 199 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TBC1D32Q96NH3 1257 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TARS2Q9BW92 718 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 MRPL4Q9BYD3 311 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 ATXN3LQ9H3M9 355 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 KMT5AQ9NQR1 393 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 DDX19AQ9NUU7 478 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TUBGCP4Q9UGJ1 667 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 AFF4Q9UHB7 1163 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 KIAA1024Q9UPX6 916 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TNFSF13BQ9Y275 285 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 YIPF1Q9Y548 306 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TIMM13Q9Y5L4 95 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 NUP205Q92621 2012 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 NCANO14594 1321 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 KIAA1549LQ6ZVL6 1849 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SPECC1L-ADORA2AF8WAN1 911 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SLC16A4O15374 487 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 MICAL2O94851 1124 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 MCF2P10911 925 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 TDGF1P13385 188 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 RPL9P32969 192 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 ALDH1A3P47895 512 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 NPTX2P47972 431 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 PXNP49023 591 aaPredicted RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 EPHB3P54753 998 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 YWHAHQ04917 246 aaPredicted RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 RAD51AP2Q09MP3 1159 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 PTGDRQ13258 359 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SF3A2Q15428 464 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 TAF12Q16514 161 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 ME3Q16798 604 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 ARHGAP15Q53QZ3 475 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 STXBP5Q5T5C0 1151 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 GPR158Q5T848 1215 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 MPZL3Q6UWV2 235 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 DSTYKQ6XUX3 929 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 MAP4K3Q8IVH8 894 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 NSUN7Q8NE18 718 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SHKBP1Q8TBC3 707 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SNX29Q8TEQ0 813 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 DDX1Q92499 740 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SPOCK2Q92563 424 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 E2F7Q96AV8 911 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 BICD1Q96G01 975 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SUSD3Q96L08 255 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 ACO2Q99798 780 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 GPR88Q9GZN0 384 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 ARRDC1-AS1Q9H2J1 176 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 C8orf33Q9H7E9 229 aaPredicted RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 GTSE1Q9NYZ3 720 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 LRWD1Q9UFC0 647 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 RALYQ9UKM9 306 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 ANGPTL2Q9UKU9 493 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 PCDHB8Q9UN66 801 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SLC27A5Q9Y2P5 690 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 THADAQ6YHU6 1953 aa7.29□□□□□ -1.24
RTFDC1-206ENST00000477485 SFI1A8K8P3 1242 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 E9PMD0 336 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 CHADO15335 359 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 EPB41L2O43491 1005 aaKnown RBP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 HIP1RO75146 1068 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 MOSPD3O75425 235 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 RPP40O75818 363 aaKnown RBP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 SOAT2O75908 522 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 CXCL8P10145 99 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 GABRR2P28476 465 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 HOXC13P31276 330 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 CTHP32929 405 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 CNR2P34972 360 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 TNK2Q07912 1038 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 DUSP4Q13115 394 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 GAS6Q14393 721 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 NBR1Q14596 966 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 NOLC1Q14978 699 aaKnown RBP eCLIP7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 ECM1Q16610 540 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 ARHGAP29Q52LW3 1261 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 DGKKQ5KSL6 1271 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 TTC38Q5R3I4 469 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 ARMCX5Q6P1M9 558 aa7.28□□□□□ -1.24
RTFDC1-206ENST00000477485 C1orf228Q6PIY5 440 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms