RNA–Protein interactions for RNA: ENST00000477188.1

MMACHC-202, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

TSL 3

Gene MMACHC, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-202ENST00000477188 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
MMACHC-202ENST00000477188 ZMAT2Q96NC0 199 aaKnown RBP12.9□□□□□ -0.34
MMACHC-202ENST00000477188 LRRC3BQ96PB8 259 aa12.9□□□□□ -0.34
MMACHC-202ENST00000477188 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
MMACHC-202ENST00000477188 AFF4Q9UHB7 1163 aaKnown RBP12.9□□□□□ -0.34
MMACHC-202ENST00000477188 SYN3O14994 580 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 MED24O75448 989 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 VNN2O95498 520 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 CPB1P15086 417 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 HOXA6P31267 233 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 NAMPTP43490 491 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 NOVA1P51513 510 aaKnown RBP12.89□□□□□ -0.35
MMACHC-202ENST00000477188 MLLT6P55198 1093 aaPredicted RBP12.89□□□□□ -0.35
MMACHC-202ENST00000477188 TNK2Q07912 1038 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 SCRN1Q12765 414 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 FOXC1Q12948 553 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
MMACHC-202ENST00000477188 ACAP1Q15027 740 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 PLA2G2CQ5R387 149 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 RNF43Q68DV7 783 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 C1orf228Q6PIY5 440 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 CACNA2D4Q7Z3S7 1137 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 TNFRSF25Q93038 417 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 LOXL4Q96JB6 756 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 LRRC3Q9BY71 257 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 CDT1Q9H211 546 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 POLR3BQ9NW08 1133 aaPredicted RBP12.89□□□□□ -0.35
MMACHC-202ENST00000477188 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
MMACHC-202ENST00000477188 STK36Q9NRP7 1315 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 NUP205Q92621 2012 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 NEMFO60524 1076 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 TOP3BO95985 862 aaKnown RBP12.88□□□□□ -0.35
MMACHC-202ENST00000477188 OR4Q2P0C623 313 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 MCM4P33991 863 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 ZNF568Q3ZCX4 644 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 RALGPS2Q86X27 583 aaPredicted RBP12.88□□□□□ -0.35
MMACHC-202ENST00000477188 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 ARID3BQ8IVW6 561 aaPredicted RBP12.88□□□□□ -0.35
MMACHC-202ENST00000477188 E2F7Q96AV8 911 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 PGLYRP2Q96PD5 576 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 EDEM2Q9BV94 578 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 DNAJC25Q9H1X3 360 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 CRISPLD1Q9H336 500 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
MMACHC-202ENST00000477188 ARHGEF35A5YM69 484 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 MEFVO15553 781 aaPredicted RBP12.87□□□□□ -0.35
MMACHC-202ENST00000477188 PRAMEF12O95522 483 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 XRCC6P12956 609 aaKnown RBP eCLIP12.87□□□□□ -0.35
MMACHC-202ENST00000477188 XBP1P17861 261 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 KRT2P35908 639 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 GRM5P41594 1212 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 YARSP54577 528 aaKnown RBP12.87□□□□□ -0.35
MMACHC-202ENST00000477188 XKR4Q5GH76 650 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 ALKAL1Q6UXT8 129 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 DDX12PQ92771 950 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 SUSD3Q96L08 255 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 TBC1D32Q96NH3 1257 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 CCDC94Q9BW85 323 aaPredicted RBP12.87□□□□□ -0.35
MMACHC-202ENST00000477188 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
MMACHC-202ENST00000477188 TMEM60Q9H2L4 133 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 TOPORSQ9NS56 1045 aaPredicted RBP12.87□□□□□ -0.35
MMACHC-202ENST00000477188 SLC38A7Q9NVC3 462 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 CYP46A1Q9Y6A2 500 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
MMACHC-202ENST00000477188 TSC2P49815 1807 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 SOAT2O75908 522 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 CDKL5O76039 1030 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
MMACHC-202ENST00000477188 CYP11B2P19099 503 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 FOSBP53539 338 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 PPP2R5AQ15172 486 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 GAREM2Q75VX8 874 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 TTC9BQ8N6N2 239 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
MMACHC-202ENST00000477188 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 ADAM33Q9BZ11 813 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 GPR88Q9GZN0 384 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 TUFT1Q9NNX1 390 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 VPS45Q9NRW7 570 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 TUBGCP4Q9UGJ1 667 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 WASF3Q9UPY6 502 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 TNFSF13BQ9Y275 285 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 PCDHGA5Q9Y5G8 931 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 TIMM13Q9Y5L4 95 aaPredicted RBP12.86□□□□□ -0.35
MMACHC-202ENST00000477188 ANK1P16157 1881 aa12.86□□□□□ -0.35
MMACHC-202ENST00000477188 DSPP15924 2871 aaKnown RBP12.86□□□□□ -0.35
MMACHC-202ENST00000477188 ZNF638Q14966 1978 aaKnown RBP12.85□□□□□ -0.35
MMACHC-202ENST00000477188 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
MMACHC-202ENST00000477188 DPYSL4O14531 572 aa12.85□□□□□ -0.35
MMACHC-202ENST00000477188 DCLK1O15075 740 aa12.85□□□□□ -0.35
MMACHC-202ENST00000477188 CTDNEP1O95476 244 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms