RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 TRIM65Q6PJ69 517 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 GLB1LQ6UWU2 654 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 TMCO2Q7Z6W1 182 aaPredicted RBP17.1■□□□□ 0.33
PSMD4-211ENST00000476855 BEST2Q8NFU1 509 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 TOP1MTQ969P6 601 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 TTYH3Q9C0H2 523 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 RAB20Q9NX57 234 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 MTUS1Q9ULD2 1270 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 LRFN2Q9ULH4 789 aa17.1■□□□□ 0.33
PSMD4-211ENST00000476855 ANO9A1A5B4 782 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 EPHB6O15197 1021 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 HOXA2O43364 376 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 B4GALT3O60512 393 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 POMCP01189 267 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 ITGB3P05106 788 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 LRPAP1P30533 357 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 APBA1Q02410 837 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 CETN1Q12798 172 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 NCOA4Q13772 614 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 LEXMQ3ZCV2 418 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 LSM14BQ9BX40 385 aaKnown RBP17.09■□□□□ 0.33
PSMD4-211ENST00000476855 XYLT2Q9H1B5 865 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 GANQ9H2C0 597 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 RC3H2Q9HBD1 1191 aaKnown RBP17.09■□□□□ 0.33
PSMD4-211ENST00000476855 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 SLC38A7Q9NVC3 462 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 INPP5FQ9Y2H2 1132 aa17.09■□□□□ 0.33
PSMD4-211ENST00000476855 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.09■□□□□ 0.33
PSMD4-211ENST00000476855 PPEF2O14830 753 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 PHACTR2O75167 634 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 DGKIO75912 1065 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 ASS1P00966 412 aaKnown RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 AMHP03971 560 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 ALADP13716 330 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 KCNA5P22460 613 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 SSTR3P32745 418 aaPredicted RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 MYL6P60660 151 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 ERVK-21P61565 698 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 DSC1Q08554 894 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 TBX2Q13207 712 aaPredicted RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 FIGNQ5HY92 759 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 C9orf57Q5W0N0 161 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 SPECC1LQ69YQ0 1117 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 TMC6Q7Z403 805 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 RSPH1Q8WYR4 309 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 ZNF689Q96CS4 500 aaPredicted RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 TGS1Q96RS0 853 aaKnown RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 RAD9AQ99638 391 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 PI4K2AQ9BTU6 479 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 TBC1D13Q9NVG8 400 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 AJAP1Q9UKB5 411 aaPredicted RBP17.08■□□□□ 0.32
PSMD4-211ENST00000476855 WDFY4Q6ZS81 3184 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.32
PSMD4-211ENST00000476855 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 PIRO00625 290 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 ZC3H11AO75152 810 aaKnown RBP eCLIP17.07■□□□□ 0.32
PSMD4-211ENST00000476855 DDHD2O94830 711 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 UPP2O95045 317 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 GJB5O95377 273 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
PSMD4-211ENST00000476855 TUSC3Q13454 348 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 KLHDC7AQ5VTJ3 777 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 ARHGEF19Q8IW93 802 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 URGCPQ8TCY9 931 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 ELMO3Q96BJ8 720 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 VRTNQ9H8Y1 702 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 FAM207AQ9NSI2 230 aaPredicted RBP17.07■□□□□ 0.32
PSMD4-211ENST00000476855 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 CACNG4Q9UBN1 327 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 APEX2Q9UBZ4 518 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 AGAP1Q9UPQ3 857 aa17.07■□□□□ 0.32
PSMD4-211ENST00000476855 LINC01553A4QN01 128 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 GYPCP04921 128 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 KRT19P08727 400 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 ATICP31939 592 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 NOP14P78316 857 aaKnown RBP17.06■□□□□ 0.32
PSMD4-211ENST00000476855 RBP5P82980 135 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 TRPC3Q13507 836 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 SPOPLQ6IQ16 392 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
PSMD4-211ENST00000476855 GJB7Q6PEY0 223 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 ZNF280BQ86YH2 543 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 LRRC52Q8N7C0 313 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 NEK11Q8NG66 645 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 TATDN2Q93075 761 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 NT5C1BQ96P26 610 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 NAA15Q9BXJ9 866 aaKnown RBP17.06■□□□□ 0.32
PSMD4-211ENST00000476855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.32
PSMD4-211ENST00000476855 FBXL5Q9UKA1 691 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 NUB1Q9Y5A7 615 aa17.06■□□□□ 0.32
PSMD4-211ENST00000476855 FHOD1Q9Y613 1164 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms