RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 MAGEB10Q96LZ2 347 aaPredicted RBP6.73□□□□□ -1.33
NUP58-209ENST00000476553 ENKD1Q9H0I2 346 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 MYLK2Q9H1R3 596 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 ALG13Q9NP73 1137 aaKnown RBP6.73□□□□□ -1.33
NUP58-209ENST00000476553 VTA1Q9NP79 307 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 RRN3Q9NYV6 651 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 PDP2Q9P2J9 529 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 NCDNQ9UBB6 729 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 EIF2B4Q9UI10 523 aaKnown RBP6.73□□□□□ -1.33
NUP58-209ENST00000476553 DNAI1Q9UI46 699 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 GJD2Q9UKL4 321 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 LRCH1Q9Y2L9 728 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 MRFAP1Q9Y605 127 aa6.73□□□□□ -1.33
NUP58-209ENST00000476553 TCRBV16S1A1N1A0A5B0 115 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 FAM170AA1A519 330 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 M0R3H8 397 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 AP1G1O43747 822 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 ZBTB48P10074 688 aaPredicted RBP6.72□□□□□ -1.33
NUP58-209ENST00000476553 HNRNPLP14866 589 aaKnown RBP eCLIP6.72□□□□□ -1.33
NUP58-209ENST00000476553 SEC24CP53992 1094 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 APBA1Q02410 837 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 PPFIA1Q13136 1202 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 ZCCHC8Q6NZY4 707 aaKnown RBP6.72□□□□□ -1.33
NUP58-209ENST00000476553 PGM2L1Q6PCE3 622 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 CASC1Q6TDU7 716 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 LILRA3Q8N6C8 439 aaPredicted RBP6.72□□□□□ -1.33
NUP58-209ENST00000476553 SIMC1Q8NDZ2 872 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 FAM204AQ9H8W3 233 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 KMT5AQ9NQR1 393 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 SH3GLB2Q9NR46 395 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 BLOC1S4Q9NUP1 217 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 ACAD8Q9UKU7 415 aa6.72□□□□□ -1.33
NUP58-209ENST00000476553 TRIM75PA6NK02 468 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 ZNF891A8MT65 544 aaPredicted RBP6.71□□□□□ -1.34
NUP58-209ENST00000476553 PQBP1O60828 265 aaKnown RBP6.71□□□□□ -1.34
NUP58-209ENST00000476553 TMCC2O75069 709 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 IFIT1P09914 478 aaKnown RBP6.71□□□□□ -1.34
NUP58-209ENST00000476553 FAM200BP0CF97 657 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 AKAP5P24588 427 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 G3BP1Q13283 466 aaKnown RBP eCLIP6.71□□□□□ -1.34
NUP58-209ENST00000476553 FAAH2Q6GMR7 532 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 RETSATQ6NUM9 610 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 OTOP1Q7RTM1 612 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 TBC1D1Q86TI0 1168 aaPredicted RBP6.71□□□□□ -1.34
NUP58-209ENST00000476553 NXPE1Q8N323 547 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 BOLLQ8N9W6 283 aaKnown RBP6.71□□□□□ -1.34
NUP58-209ENST00000476553 SMC1BQ8NDV3 1235 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 GOLGA1Q92805 767 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 RPGRQ92834 1020 aaKnown RBP6.71□□□□□ -1.34
NUP58-209ENST00000476553 NELL2Q99435 816 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 LRFN3Q9BTN0 628 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 UNC45AQ9H3U1 944 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 ARFGAP3Q9NP61 516 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 SMC4Q9NTJ3 1288 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 TBC1D22BQ9NU19 505 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 MKS1Q9NXB0 559 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 CHST2Q9Y4C5 530 aa6.71□□□□□ -1.34
NUP58-209ENST00000476553 NCAM2O15394 837 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 PCDHGA12O60330 932 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 OFD1O75665 1012 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 MTA2O94776 668 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 C1RP00736 705 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 LSSP48449 732 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 PTH2RP49190 550 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 MPP1Q00013 466 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 DSG1Q02413 1049 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 FOXI1Q12951 378 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 IFIT5Q13325 482 aaKnown RBP6.7□□□□□ -1.34
NUP58-209ENST00000476553 TERF2Q15554 542 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 VPS53Q5VIR6 699 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 BRINP3Q76B58 766 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 ANKRD18AQ8IVF6 992 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 LCORLQ8N3X6 602 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 MYCT1Q8N699 235 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 NSUN6Q8TEA1 469 aaKnown RBP6.7□□□□□ -1.34
NUP58-209ENST00000476553 NUP133Q8WUM0 1156 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 ZBTB10Q96DT7 871 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 NDC1Q9BTX1 674 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 BOCQ9BWV1 1114 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 EMC7Q9NPA0 242 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 SMYD2Q9NRG4 433 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 ISY1Q9ULR0 285 aaKnown RBP6.7□□□□□ -1.34
NUP58-209ENST00000476553 PCDHGA9Q9Y5G4 932 aaKnown RBP6.7□□□□□ -1.34
NUP58-209ENST00000476553 PCDHGA8Q9Y5G5 932 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 PCDHGA7Q9Y5G6 932 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 PCDHGA6Q9Y5G7 932 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 PCDHGA3Q9Y5H0 932 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 PCDHGA2Q9Y5H1 932 aa6.7□□□□□ -1.34
NUP58-209ENST00000476553 GAGE12BA1L429 117 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 RASA4BC9J798 803 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 DAPK3O43293 454 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 HOXA3O43365 443 aaPredicted RBP6.69□□□□□ -1.34
NUP58-209ENST00000476553 RASA4O43374 803 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 BAIAP3O94812 1187 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 PYGLP06737 847 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 APOBEC3AP31941 199 aaPredicted RBP6.69□□□□□ -1.34
NUP58-209ENST00000476553 ELLP55199 621 aaPredicted RBP6.69□□□□□ -1.34
NUP58-209ENST00000476553 TNFAIP2Q03169 654 aa6.69□□□□□ -1.34
NUP58-209ENST00000476553 FOXF2Q12947 444 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms