RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SYCP3Q8IZU3 236 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 FAM212AQ96EL1 285 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 TSPAN18Q96SJ8 248 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 TRIM9Q9C026 710 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 AVENQ9NQS1 362 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-205ENST00000476387 FAM86C1Q9NVL1 165 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 TUBGCP4Q9UGJ1 667 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 AGO2Q9UKV8 859 aaKnown RBP17.58■□□□□ 0.4
COL1A1-205ENST00000476387 UBQLN1Q9UMX0 589 aaKnown RBP17.58■□□□□ 0.4
COL1A1-205ENST00000476387 USP34Q70CQ2 3546 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 KRBA1A5PL33 1030 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 TISP43B9A030 160 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 PI15O43692 258 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 ATF2P15336 505 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 ELF1P32519 619 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 MCM4P33991 863 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 CASP5P51878 434 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 SPAG1Q07617 926 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 TPGS2Q68CL5 300 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 CD302Q8IX05 232 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 CCDC105Q8IYK2 499 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 TCEAL8Q8IYN2 117 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 CEP57L1Q8IYX8 460 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 APPL2Q8NEU8 664 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 ITFG1Q8TB96 612 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 LEO1Q8WVC0 666 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-205ENST00000476387 STRA6Q9BX79 667 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 DNMT3BQ9UBC3 853 aaKnown RBP17.57■□□□□ 0.4
COL1A1-205ENST00000476387 FBXL5Q9UKA1 691 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 CPSF3Q9UKF6 684 aaKnown RBP17.57■□□□□ 0.4
COL1A1-205ENST00000476387 MAFFQ9ULX9 164 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 STYXL1Q9Y6J8 313 aa17.57■□□□□ 0.4
COL1A1-205ENST00000476387 RIF1Q5UIP0 2472 aaKnown RBP17.57■□□□□ 0.4
COL1A1-205ENST00000476387 WDR27A2RRH5 827 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 LACTBL1A8MY62 500 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 CYP3A5P20815 502 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 RFX1P22670 979 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 LRPAP1P30533 357 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 ACOT2P49753 483 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 ZNF280DQ6N043 979 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 PHLDB3Q6NSJ2 640 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 PARM1Q6UWI2 310 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 FGF14Q92915 247 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 SCAND2PQ9GZW5 306 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-205ENST00000476387 TMEM206Q9H813 350 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 ARHGEF3Q9NR81 526 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 HCFC1R1Q9NWW0 138 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 CA14Q9ULX7 337 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 PCDHB8Q9UN66 801 aa17.56■□□□□ 0.4
COL1A1-205ENST00000476387 NOTCH4Q99466 2003 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 PTPRZ1P23471 2315 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-205ENST00000476387 M0QZQ0 153 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 STK25O00506 426 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 PRRG1O14668 218 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 GFRA3O60609 400 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 ADRB2P07550 413 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 RHOP08100 348 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 NBL1P41271 181 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 KCNA1Q09470 495 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 ZBTB6Q15916 424 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 CTXN3Q4LDR2 81 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 CNNM4Q6P4Q7 775 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 NPAS3Q8IXF0 933 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 DTWD2Q8NBA8 298 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 BEST2Q8NFU1 509 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 C7orf25Q9BPX7 421 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 OXCT2Q9BYC2 517 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-205ENST00000476387 FGFBP2Q9BYJ0 223 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 IKZF4Q9H2S9 585 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 TBC1D17Q9HA65 648 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 GDE1Q9NZC3 331 aa17.55■□□□□ 0.4
COL1A1-205ENST00000476387 MRPS23Q9Y3D9 190 aaKnown RBP17.55■□□□□ 0.4
COL1A1-205ENST00000476387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-205ENST00000476387 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
COL1A1-205ENST00000476387 LRG1P02750 347 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 PFKFB1P16118 471 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 CMA1P23946 247 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 AFMP43652 599 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 AARSP49588 968 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL1A1-205ENST00000476387 TMEM132DQ14C87 1099 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 FAM26FQ5R3K3 315 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 JADE1Q6IE81 842 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 UNC13DQ70J99 1090 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 RPP25Q9BUL9 199 aaKnown RBP17.54■□□□□ 0.4
COL1A1-205ENST00000476387 AFF4Q9UHB7 1163 aaKnown RBP17.54■□□□□ 0.4
COL1A1-205ENST00000476387 DERAQ9Y315 318 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 TSC2P49815 1807 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 SCN1AP35498 2009 aa17.54■□□□□ 0.4
COL1A1-205ENST00000476387 EIF3DO15371 548 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL1A1-205ENST00000476387 MICAL2O94851 1124 aa17.53■□□□□ 0.4
COL1A1-205ENST00000476387 OAZ2O95190 189 aa17.53■□□□□ 0.4
COL1A1-205ENST00000476387 IL18RAPO95256 599 aa17.53■□□□□ 0.4
COL1A1-205ENST00000476387 LDHAP00338 332 aaKnown RBP17.53■□□□□ 0.4
COL1A1-205ENST00000476387 NFICP08651 508 aa17.53■□□□□ 0.4
COL1A1-205ENST00000476387 PTPN2P17706 415 aa17.53■□□□□ 0.4
COL1A1-205ENST00000476387 GARTP22102 1010 aa17.53■□□□□ 0.4
COL1A1-205ENST00000476387 ADSSP30520 456 aa17.53■□□□□ 0.4
COL1A1-205ENST00000476387 ARPP19P56211 112 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms