RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TCEAL9Q9UHQ7 104 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 KCNH3Q9ULD8 1083 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 TPCN1Q9ULQ1 816 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 NOL7Q9UMY1 257 aaKnown RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 ZKSCAN5Q9Y2L8 839 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 INSL6Q9Y581 213 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 SLC12A7Q9Y666 1083 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 TAF6LQ9Y6J9 622 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 FNDC1Q4ZHG4 1894 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 NFASCO94856 1347 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ARID2Q68CP9 1835 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 CCDC196A0A1B0GTZ2 297 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ESYT2A0FGR8 921 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 SLC22A31A6NKX4 558 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 GRXCR1A8MXD5 290 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 RSPH10B2B2RC85 870 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 M0QZ92 97 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 CYTH3O43739 400 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ZNF500O60304 480 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ADCY5O95622 1261 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 RSPH10BP0C881 870 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 SMIM10L2AP0DMW4 78 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 SMIM10L2BP0DMW5 78 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 PTGS1P23219 599 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 PSMA5P28066 241 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 TPP2P29144 1249 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-206ENST00000476045 HOXA13P31271 388 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-206ENST00000476045 CCNFP41002 786 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ADCY7P51828 1080 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ANTXR2P58335 489 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ERVK-21P61565 698 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 UBE2HP62256 183 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 RAD51AP2Q09MP3 1159 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 MTMR1Q13613 665 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 NECTIN1Q15223 517 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 NR0B2Q15466 257 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 PTPROQ16827 1216 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 HSDL1Q3SXM5 330 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 RALGPS1Q5JS13 557 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 LARP1BQ659C4 914 aaKnown RBP4.74□□□□□ -1.65
VPS13D-206ENST00000476045 FAM173BQ6P4H8 233 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 BLOC1S2Q6QNY1 142 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 NIPA1Q7RTP0 329 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 FERMT3Q86UX7 667 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 MICU3Q86XE3 530 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 SLITRK4Q8IW52 837 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 C17orf53Q8N3J3 647 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-206ENST00000476045 USP38Q8NB14 1042 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 TMEM87AQ8NBN3 555 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 CCDC148Q8NFR7 591 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 IL31RAQ8NI17 732 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 BAHD1Q8TBE0 780 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-206ENST00000476045 IGDCC4Q8TDY8 1250 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 RSPH1Q8WYR4 309 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ATP6V0A1Q93050 837 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 FAM84AQ96KN4 292 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ASB2Q96Q27 587 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 UHRF1Q96T88 793 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-206ENST00000476045 GPR20Q99678 358 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 C16orf70Q9BSU1 422 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ALG1Q9BT22 464 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 NT5C1AQ9BXI3 368 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 TM6SF1Q9BZW5 370 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 PSTPIP2Q9H939 334 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 VAT1LQ9HCJ6 419 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 GPATCH2Q9NW75 528 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ERAP1Q9NZ08 941 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 TUBE1Q9UJT0 475 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 FAM50BQ9Y247 325 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 SQORQ9Y6N5 450 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 COL1A2P08123 1366 aa4.74□□□□□ -1.65
VPS13D-206ENST00000476045 ADGRA3Q8IWK6 1321 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 C5orf42Q9H799 3197 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 UQCRHLA0A096LP55 91 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 MBLAC1A4D2B0 266 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 RRN3P2A6NIE6 340 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 MEIS2O14770 477 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 ZBTB43O43298 467 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 NCK2O43639 380 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 RRP9O43818 475 aaKnown RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 JAK2O60674 1132 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 NBNO60934 754 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 LETM1O95202 739 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 TSPAN15O95858 294 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 UQCRHP07919 91 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 ZGLP1P0C6A0 271 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 KCNA2P16389 499 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 RPS6KB1P23443 525 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 THPOP40225 353 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 RABGGTBP53611 331 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 NAPAP54920 295 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 CHMP4BP1P59074 171 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 MRPS9P82933 396 aaKnown RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 HTRA4P83105 476 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 TAP1Q03518 808 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 PPFIA1Q13136 1202 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 FZD5Q13467 585 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 SLC35G1Q2M3R5 365 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 PLEKHG4Q58EX7 1191 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms