RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 PPP1R3GB7ZBB8 358 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 PER2O15055 1255 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 MBTPS2O43462 519 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 DCXO43602 365 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 LILRB3O75022 631 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 EPB41P11171 864 aaKnown RBP16.32■□□□□ 0.2
SNX13-207ENST00000475800 KRT13P13646 458 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 ALADP13716 330 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNX13-207ENST00000475800 CASP4P49662 377 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 TAF6P49848 677 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 GUCY2FP51841 1108 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 RBP5P82980 135 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 RBM10P98175 930 aaKnown RBP16.32■□□□□ 0.2
SNX13-207ENST00000475800 PAK1Q13153 545 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 COL19A1Q14993 1142 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 DUSP6Q16828 381 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 CTC1Q2NKJ3 1217 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 KLHL10Q6JEL2 608 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 ANKS3Q6ZW76 656 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 ZC3H3Q8IXZ2 948 aaKnown RBP16.32■□□□□ 0.2
SNX13-207ENST00000475800 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 EFHBQ8N7U6 833 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 APPL2Q8NEU8 664 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 RIN2Q8WYP3 895 aaPredicted RBP16.32■□□□□ 0.2
SNX13-207ENST00000475800 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
SNX13-207ENST00000475800 CCDC127Q96BQ5 260 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 MTMR12Q9C0I1 747 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 RXFP1Q9HBX9 757 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 DACH1Q9UI36 760 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 CD207Q9UJ71 328 aa16.32■□□□□ 0.2
SNX13-207ENST00000475800 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
SNX13-207ENST00000475800 M0QZQ0 153 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 IKBKBO14920 756 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 SLC16A3O15427 465 aaKnown RBP16.31■□□□□ 0.2
SNX13-207ENST00000475800 C1RP00736 705 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 ADH1AP07327 375 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
SNX13-207ENST00000475800 BRCC3P46736 316 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 LILRA4P59901 499 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 CLDN10P78369 228 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 SV2CQ496J9 727 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 RBM43Q6ZSC3 357 aaKnown RBP16.31■□□□□ 0.2
SNX13-207ENST00000475800 TAS1R1Q7RTX1 841 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 CEP57Q86XR8 500 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 ADHFE1Q8IWW8 467 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 CEP63Q96MT8 703 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 MUTYHQ9UIF7 546 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
SNX13-207ENST00000475800 PCDHB8Q9UN66 801 aa16.31■□□□□ 0.2
SNX13-207ENST00000475800 H7C4K7 107 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 C2CD2LO14523 706 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 AKAP3O75969 853 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
SNX13-207ENST00000475800 ITGB3P05106 788 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
SNX13-207ENST00000475800 VAMP7P51809 220 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 ADAM15Q13444 863 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 PSMD5Q16401 504 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
SNX13-207ENST00000475800 RTP2Q5QGT7 225 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 DSTYKQ6XUX3 929 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 OR5B17Q8NGF7 314 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 KLHL5Q96PQ7 755 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
SNX13-207ENST00000475800 DSEQ9UL01 958 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 AGAP1Q9UPQ3 857 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
SNX13-207ENST00000475800 PTPRJQ12913 1337 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 TRIM49BA6NDI0 452 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 PRR33A8MZF0 331 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 STX10O60499 249 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 CLASP2O75122 1294 aaKnown RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 KRT19P08727 400 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 CNPP09543 421 aaKnown RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 ODC1P11926 461 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 TYMPP19971 482 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 KLRC2P26717 231 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 NLRP12P59046 1061 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 MCCD1P59942 119 aaPredicted RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 BFSP1Q12934 665 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 SMAD4Q13485 552 aaKnown RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 SMAD2Q15796 467 aaKnown RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 LMBRD2Q68DH5 695 aaPredicted RBP16.29■□□□□ 0.2
SNX13-207ENST00000475800 TTI2Q6NXR4 508 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 ELMSAN1Q6PJG2 1045 aa16.29■□□□□ 0.2
SNX13-207ENST00000475800 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms