RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 NEK8Q86SG6 692 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 NOSTRINQ8IVI9 506 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 ZBTB8OSQ8IWT0 167 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 SLFN12Q8IYM2 578 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 C3orf58Q8NDZ4 430 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 SHKBP1Q8TBC3 707 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 TCEAL3Q969E4 200 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 NAP1L4Q99733 375 aaKnown RBP15.32■□□□□ 0.04
FAM3A-218ENST00000475657 C2orf40Q9H1Z8 148 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 SLITRK6Q9H5Y7 841 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 OBP2AQ9NY56 170 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 FBXL5Q9UKA1 691 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 NEUROG3Q9Y4Z2 214 aa15.32■□□□□ 0.04
FAM3A-218ENST00000475657 ITPR1Q14643 2758 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 TTLL13PA6NNM8 815 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 I3L4J1 428 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 ACKR2O00590 384 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 PXNP49023 591 aaPredicted RBP15.31■□□□□ 0.04
FAM3A-218ENST00000475657 ARPP19P56211 112 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 PLCB2Q00722 1185 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 TWF1Q12792 350 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 PRPF4BQ13523 1007 aaKnown RBP15.31■□□□□ 0.04
FAM3A-218ENST00000475657 ELF2Q15723 593 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 MAPK6Q16659 721 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 DCAF4L1Q3SXM0 396 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 SNX21Q969T3 373 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 LRRC3Q9BY71 257 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 DUSP15Q9H1R2 295 aaPredicted RBP15.31■□□□□ 0.04
FAM3A-218ENST00000475657 GTSE1Q9NYZ3 720 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 SLC8A2Q9UPR5 921 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 ARID2Q68CP9 1835 aa15.31■□□□□ 0.04
FAM3A-218ENST00000475657 CCDC194A0A1B0GVG4 234 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 BCLAF3A2AJT9 711 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 FAM205CA6NFA0 338 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 MARCH6O60337 910 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 CAVIN2O95810 425 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 TOP3BO95985 862 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 PRKCBP05771 671 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 WEE1P30291 646 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 FOSBP53539 338 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 PTPAQ15257 358 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 GLRA4Q5JXX5 417 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 PIK3AP1Q6ZUJ8 805 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 ARID3BQ8IVW6 561 aaPredicted RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 NECAB1Q8N987 351 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 MCPH1Q8NEM0 835 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 CCDC43Q96MW1 224 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 TMEM209Q96SK2 561 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 EIF2AK1Q9BQI3 630 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 HELZ2Q9BYK8 2649 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 RBM19Q9Y4C8 960 aaKnown RBP15.3■□□□□ 0.04
FAM3A-218ENST00000475657 WDFY3Q8IZQ1 3526 aa15.3■□□□□ 0.04
FAM3A-218ENST00000475657 SMIM28A0A1B0GU29 152 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 LNP1A1A4G5 178 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 CCNT1O60563 726 aaKnown RBP15.29■□□□□ 0.04
FAM3A-218ENST00000475657 BAG4O95429 457 aaKnown RBP15.29■□□□□ 0.04
FAM3A-218ENST00000475657 KARSQ15046 597 aaKnown RBP15.29■□□□□ 0.04
FAM3A-218ENST00000475657 TMEM132AQ24JP5 1023 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 CTXN3Q4LDR2 81 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 XKR4Q5GH76 650 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 PKN3Q6P5Z2 889 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 LRRC3BQ96PB8 259 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 GOLGA2P5Q9HBQ8 144 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 TMEM9BQ9NQ34 198 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 SLC38A7Q9NVC3 462 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 MSRB2Q9Y3D2 182 aa15.29■□□□□ 0.04
FAM3A-218ENST00000475657 PDCD11Q14690 1871 aaKnown RBP15.29■□□□□ 0.04
FAM3A-218ENST00000475657 A0A1W2PRU2 124 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 DPYSL4O14531 572 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 CTDNEP1O95476 244 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 CREB5Q02930 508 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 PLD1Q13393 1074 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 ITPRIPL2Q3MIP1 535 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 TMEM196Q5HYL7 178 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 EEF1DP3Q658K8 133 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 ZNF280DQ6N043 979 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 ALKAL1Q6UXT8 129 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 APBB1IPQ7Z5R6 666 aaPredicted RBP15.28■□□□□ 0.04
FAM3A-218ENST00000475657 TMC8Q8IU68 726 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 BEST2Q8NFU1 509 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 MKNK1Q9BUB5 465 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 CCDC113Q9H0I3 377 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 GPRC5CQ9NQ84 441 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 ORC3Q9UBD5 711 aaPredicted RBP15.28■□□□□ 0.04
FAM3A-218ENST00000475657 IGSF10Q6WRI0 2623 aa15.28■□□□□ 0.04
FAM3A-218ENST00000475657 ASH1LQ9NR48 2969 aaKnown RBP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 CACNA1EQ15878 2313 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 PCNX2A6NKB5 2137 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 PODXLO00592 558 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 CDX4O14627 284 aaPredicted RBP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 KHNYNO15037 678 aaKnown RBP15.27■□□□□ 0.04
FAM3A-218ENST00000475657 PFKFB2O60825 505 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 CDKL5O76039 1030 aa15.27■□□□□ 0.04
FAM3A-218ENST00000475657 CD2BP2O95400 341 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms