RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 PXNP49023 591 aaPredicted RBP16.69■□□□□ 0.26
NME1-206ENST00000475573 YARSP54577 528 aaKnown RBP16.69■□□□□ 0.26
NME1-206ENST00000475573 PLD1Q13393 1074 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
NME1-206ENST00000475573 CALCRLQ16602 461 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 XKR4Q5GH76 650 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 ATF7IP2Q5U623 682 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 TMC8Q8IU68 726 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 ZNF274Q96GC6 653 aaPredicted RBP16.69■□□□□ 0.26
NME1-206ENST00000475573 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
NME1-206ENST00000475573 OBP2AQ9NY56 170 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 YIPF1Q9Y548 306 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 NUB1Q9Y5A7 615 aa16.69■□□□□ 0.26
NME1-206ENST00000475573 A0A1W2PRU2 124 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 SRRM3A6NNA2 597 aaPredicted RBP16.68■□□□□ 0.26
NME1-206ENST00000475573 DPYSL4O14531 572 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 GIPC1O14908 333 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 CPB1P15086 417 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 PPP2R5AQ15172 486 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 PLK5Q496M5 336 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 DAB2IPQ5VWQ8 1189 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 TCEAL6Q6IPX3 200 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 ALKAL1Q6UXT8 129 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 ARID3BQ8IVW6 561 aaPredicted RBP16.68■□□□□ 0.26
NME1-206ENST00000475573 APPL2Q8NEU8 664 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 TTC8Q8TAM2 541 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 OXER1Q8TDS5 423 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 GATA6Q92908 595 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 TCEAL3Q969E4 200 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 ZFYVE19Q96K21 471 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 CCDC94Q9BW85 323 aaPredicted RBP16.68■□□□□ 0.26
NME1-206ENST00000475573 LRRC3Q9BY71 257 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 SLC8A2Q9UPR5 921 aa16.68■□□□□ 0.26
NME1-206ENST00000475573 DMXL2Q8TDJ6 3036 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 ATG2BQ96BY7 2078 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 A0A087WWV3 80 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 ATG13O75143 517 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 RPL9P32969 192 aaKnown RBP16.67■□□□□ 0.26
NME1-206ENST00000475573 GRM5P41594 1212 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 EFNA5P52803 228 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 ELF2Q15723 593 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 EARS2Q5JPH6 523 aaKnown RBP16.67■□□□□ 0.26
NME1-206ENST00000475573 PKN3Q6P5Z2 889 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 RNF19BQ6ZMZ0 732 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 CAMKK1Q8N5S9 505 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 BEST2Q8NFU1 509 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 NUP205Q92621 2012 aa16.67■□□□□ 0.26
NME1-206ENST00000475573 DSPP15924 2871 aaKnown RBP16.66■□□□□ 0.26
NME1-206ENST00000475573 C4orf47A7E2U8 309 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 CDKL5O76039 1030 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 SPINK2P20155 84 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 STXBP5Q5T5C0 1151 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 SH3PXD2AQ5TCZ1 1133 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 NT5DC1Q5TFE4 455 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 LRSAM1Q6UWE0 723 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 CEP120Q8N960 986 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 ZCCHC14Q8WYQ9 949 aaKnown RBP16.66■□□□□ 0.26
NME1-206ENST00000475573 DDX12PQ92771 950 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 ZMAT2Q96NC0 199 aaKnown RBP16.66■□□□□ 0.26
NME1-206ENST00000475573 LRRC3BQ96PB8 259 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 TMEM209Q96SK2 561 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 MKNK1Q9BUB5 465 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 KIFC3Q9BVG8 833 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 DNAJC25Q9H1X3 360 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 TPCN1Q9ULQ1 816 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 TNFSF13BQ9Y275 285 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 STK36Q9NRP7 1315 aa16.66■□□□□ 0.26
NME1-206ENST00000475573 AKAP13Q12802 2813 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 FAM205CA6NFA0 338 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 NEMFO60524 1076 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 RHOBTB1O94844 696 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 CAVIN2O95810 425 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 SPATA31C1P0DKV0 1188 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 CEACAM1P13688 526 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 KCNE1P15382 129 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 CYP11B2P19099 503 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 MCM4P33991 863 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 TXKP42681 527 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 EPHB3P54753 998 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 TNK2Q07912 1038 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 GRSF1Q12849 480 aaKnown RBP eCLIP16.65■□□□□ 0.26
NME1-206ENST00000475573 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
NME1-206ENST00000475573 PTPAQ15257 358 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 ITPRIPL2Q3MIP1 535 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 TMEM196Q5HYL7 178 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 BPIFB1Q8TDL5 484 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 NACC1Q96RE7 527 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 OXCT2Q9BYC2 517 aaPredicted RBP16.65■□□□□ 0.26
NME1-206ENST00000475573 DUSP15Q9H1R2 295 aaPredicted RBP16.65■□□□□ 0.26
NME1-206ENST00000475573 CDT1Q9H211 546 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
NME1-206ENST00000475573 LNP1A1A4G5 178 aa16.64■□□□□ 0.25
NME1-206ENST00000475573 FGF19O95750 216 aa16.64■□□□□ 0.25
NME1-206ENST00000475573 CSRP1P21291 193 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms