RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 FGFR1OPO95684 399 aaKnown RBP16.94■□□□□ 0.3
CPSF3-203ENST00000475482 CLTAP09496 248 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 SPATA31D3P0C874 917 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
CPSF3-203ENST00000475482 SP100P23497 879 aaPredicted RBP16.94■□□□□ 0.3
CPSF3-203ENST00000475482 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 STK4Q13043 487 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 RAB33AQ14088 237 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 SEZ6Q53EL9 994 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 SLC39A4Q6P5W5 647 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 FOXR2Q6PJQ5 311 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 SARM1Q6SZW1 724 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 SPATA31D4Q6ZUB0 917 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 CCDC149Q6ZUS6 474 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 MAP4K3Q8IVH8 894 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 KREMEN2Q8NCW0 462 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 ANKRD20A12PQ8NF67 263 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 NOC3LQ8WTT2 800 aaKnown RBP16.94■□□□□ 0.3
CPSF3-203ENST00000475482 TSG101Q99816 390 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 STRA6Q9BX79 667 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 SLC39A2Q9NP94 309 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 MTRRQ9UBK8 725 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 NFE2L3Q9Y4A8 694 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 BACE2Q9Y5Z0 518 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 ANK1P16157 1881 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 NOTCH4Q99466 2003 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 A0A0B4J269 797 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 K7ENM7 598 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 PODXLO00592 558 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 TRAPPC3O43617 180 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 TBC1D4O60343 1298 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 ZMYND10O75800 440 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 PPP1R37O75864 691 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 CCNE1P24864 410 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 TKTP29401 623 aaKnown RBP16.93■□□□□ 0.3
CPSF3-203ENST00000475482 BRCC3P46736 316 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 ALCAMQ13740 583 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 NCAPHQ15003 741 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 KYAT1Q16773 422 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 RSPO2Q6UXX9 243 aaPredicted RBP16.93■□□□□ 0.3
CPSF3-203ENST00000475482 OTOP3Q7RTS5 596 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 ZNF720Q7Z2F6 126 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 CEP57Q86XR8 500 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 GLYCTKQ8IVS8 523 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 TDRD5Q8NAT2 981 aaKnown RBP16.93■□□□□ 0.3
CPSF3-203ENST00000475482 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
CPSF3-203ENST00000475482 PRKD2Q9BZL6 878 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 SORCS3Q9UPU3 1222 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 HCN4Q9Y3Q4 1203 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.93■□□□□ 0.3
CPSF3-203ENST00000475482 STYXL1Q9Y6J8 313 aa16.93■□□□□ 0.3
CPSF3-203ENST00000475482 TMEM221A6NGB7 291 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 M0R296 226 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 HNRNPDLO14979 420 aaKnown RBP16.92■□□□□ 0.3
CPSF3-203ENST00000475482 SYN3O14994 580 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 N4BP1O75113 896 aaKnown RBP16.92■□□□□ 0.3
CPSF3-203ENST00000475482 TPM3P06753 285 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 CXCL8P10145 99 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 HARSP12081 509 aaKnown RBP16.92■□□□□ 0.3
CPSF3-203ENST00000475482 CDK11BP21127 795 aaKnown RBP16.92■□□□□ 0.3
CPSF3-203ENST00000475482 NMT1P30419 496 aaKnown RBP16.92■□□□□ 0.3
CPSF3-203ENST00000475482 LRPAP1P30533 357 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 LIG4P49917 911 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 LRRC63Q05C16 580 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 SPAG1Q07617 926 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 MRPL58Q14197 206 aaKnown RBP16.92■□□□□ 0.3
CPSF3-203ENST00000475482 ANKS3Q6ZW76 656 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 FAM114A1Q8IWE2 563 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 KIAA0895Q8NCT3 520 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 TSPAN18Q96SJ8 248 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 TRIM5Q9C035 493 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 MRPL44Q9H9J2 332 aaKnown RBP16.92■□□□□ 0.3
CPSF3-203ENST00000475482 MAPK8IP1Q9UQF2 711 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 UBE4BO95155 1302 aa16.92■□□□□ 0.3
CPSF3-203ENST00000475482 SPDYE4A6NLX3 237 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 I3L4J1 428 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 OGTO15294 1046 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 EIF3DO15371 548 aaKnown RBP eCLIP16.91■□□□□ 0.3
CPSF3-203ENST00000475482 CBFA2T2O43439 604 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 POU2F2P09086 479 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 CYP3A5P20815 502 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 HOXA9P31269 272 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 TNFSF9P41273 254 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 ENOX2Q16206 610 aaKnown RBP16.91■□□□□ 0.3
CPSF3-203ENST00000475482 ZC2HC1CQ53FD0 456 aaPredicted RBP16.91■□□□□ 0.3
CPSF3-203ENST00000475482 ZBTB41Q5SVQ8 909 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 SLC8B1Q6J4K2 584 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 RTL10Q7L3V2 364 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 SMG7Q92540 1137 aaKnown RBP16.91■□□□□ 0.3
CPSF3-203ENST00000475482 ACSF2Q96CM8 615 aaPredicted RBP16.91■□□□□ 0.3
CPSF3-203ENST00000475482 HVCN1Q96D96 273 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 BICD1Q96G01 975 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 SUSD3Q96L08 255 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 MFSD14AQ96MC6 490 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 FANCLQ9NW38 375 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 LIMD1Q9UGP4 676 aa16.91■□□□□ 0.3
CPSF3-203ENST00000475482 CPSF3Q9UKF6 684 aaKnown RBP16.91■□□□□ 0.3
CPSF3-203ENST00000475482 PCDHB13Q9Y5F0 798 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms