RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 FBXL21Q9UKT6 434 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 POLIQ9UNA4 740 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 SMC3Q9UQE7 1217 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 PCDHB3Q9Y5E6 796 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 FRYLO94915 3013 aa6.47□□□□□ -1.37
CPSF7-210ENST00000474684 ANHXE9PGG2 379 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TBC1D4O60343 1298 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TOM1L1O75674 476 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 NFICP08651 508 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 OR4Q2P0C623 313 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 SRFP11831 508 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 GLULP15104 373 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 FCARP24071 287 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 NMT1P30419 496 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 HOXA9P31269 272 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 MCM4P33991 863 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 CCR2P41597 374 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 CDR1P51861 262 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ZNF131P52739 623 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 YARSP54577 528 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ARPP19P56211 112 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 WNT7BP56706 349 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 MCL1Q07820 350 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ELAVL2Q12926 359 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 CUL4AQ13619 759 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 PTPAQ15257 358 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 SF3A1Q15459 793 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ENOX2Q16206 610 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 AXDND1Q5T1B0 1012 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ARL6IP4Q66PJ3 421 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 SLC8B1Q6J4K2 584 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 DCLRE1AQ6PJP8 1040 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 NUDT18Q6ZVK8 323 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ASCL5Q7RTU5 278 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 HAUS6Q7Z4H7 955 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 CCDC105Q8IYK2 499 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 SLC44A3Q8N4M1 653 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TTC9BQ8N6N2 239 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 RAD54LQ92698 747 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ATOH1Q92858 354 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TCEAL4Q96EI5 215 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 CDK5RAP3Q96JB5 506 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 UROC1Q96N76 676 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ACAP3Q96P50 834 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TCHPQ9BT92 498 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 FGFBP2Q9BYJ0 223 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 CRISPLD1Q9H336 500 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 RTN4Q9NQC3 1192 aaKnown RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 ARHGEF3Q9NR81 526 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TOPORSQ9NS56 1045 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 IGSF9Q9P2J2 1179 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 FBXL5Q9UKA1 691 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 KIF3AQ9Y496 699 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TIMM13Q9Y5L4 95 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-210ENST00000474684 INSL5Q9Y5Q6 135 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 BACE2Q9Y5Z0 518 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 CLIC4Q9Y696 253 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 NCOR2Q9Y618 2525 aa6.46□□□□□ -1.38
CPSF7-210ENST00000474684 TPRP12270 2363 aaKnown RBP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 CEP192Q8TEP8 1941 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 A0A087X0B3 334 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 TTC26A0AVF1 554 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 PRR23AA6NEV1 266 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 SHISA7A6NL88 538 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ANKRD63C9JTQ0 380 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 HNRNPDLO14979 420 aaKnown RBP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 SPTLC1O15269 473 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ST8SIA5O15466 376 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 MOSPD3O75425 235 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 FAM13AO94988 1023 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 C1RP00736 705 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 PIGRP01833 764 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 RHOP08100 348 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 POU2F2P09086 479 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 HNRNPA1P09651 372 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 GJA1P17302 382 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 MARCKSP29966 332 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 PI4KAP42356 2102 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 STRN3Q13033 797 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 MRPL58Q14197 206 aaKnown RBP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 PABPC1LQ4VXU2 614 aaKnown RBP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ZC2HC1CQ53FD0 456 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 PRSS36Q5K4E3 855 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ZNF280DQ6N043 979 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ELMSAN1Q6PJG2 1045 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 CYP26C1Q6V0L0 522 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ZPBP2Q6X784 338 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ANKS3Q6ZW76 656 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 FRMD5Q7Z6J6 570 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 SFR1Q86XK3 245 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 ZSWIM2Q8NEG5 633 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 LARP4BQ92615 738 aaKnown RBP6.45□□□□□ -1.38
CPSF7-210ENST00000474684 BICD1Q96G01 975 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 EPSTI1Q96J88 318 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 SUSD3Q96L08 255 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 CLIC6Q96NY7 704 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 USP28Q96RU2 1077 aa6.45□□□□□ -1.38
CPSF7-210ENST00000474684 TMEM209Q96SK2 561 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms