RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 GATAD2BQ8WXI9 593 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ACSBG1Q96GR2 724 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CCDC138Q96M89 665 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CAMK1GQ96NX5 476 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PPP1R10Q96QC0 940 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 PLIN2Q99541 437 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SIKE1Q9BRV8 207 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TARS2Q9BW92 718 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 CARD6Q9BX69 1037 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 THAP9Q9H5L6 903 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 AGO4Q9HCK5 861 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 COQ3Q9NZJ6 369 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SRP68Q9UHB9 627 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 PSME2Q9UL46 239 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 RWDD3Q9Y3V2 267 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CACNG2Q9Y698 323 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PIAS3Q9Y6X2 628 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SCAPERQ9BY12 1400 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 A0A1W2PPH5 198 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 LRRC14BA6NHZ5 514 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 LINC01387J3KSC0 135 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ATXN7O15265 892 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 BIRC5O15392 142 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ZBTB24O43167 697 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 URI1O94763 535 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 RB1P06400 928 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SNRPAP09012 282 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 MYBP10242 640 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PTBP1P26599 531 aaKnown RBP eCLIP3.7□□□□□ -1.822e-7■■■■■ 46.1
UBR3-208ENST00000474426 PDIA3P30101 505 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 SERPINB6P35237 376 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SLC26A3P40879 764 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CACNB3P54284 484 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ACTN3Q08043 901 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 EFTUD2Q15029 972 aaKnown RBP eCLIP3.7□□□□□ -1.82
UBR3-208ENST00000474426 GPR158Q5T848 1215 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 BZW1Q7L1Q6 419 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 SAMD7Q7Z3H4 446 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 OR8K3Q8NH51 312 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 DYDC1Q8WWB3 177 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TMA16Q96EY4 203 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 KIF12Q96FN5 646 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PPP1R36Q96LQ0 422 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CCDC74BQ96LY2 380 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 LRGUKQ96M69 825 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TSNARE1Q96NA8 513 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SHCBP1LQ9BZQ2 653 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PARVBQ9HBI1 364 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 MRPL40Q9NQ50 206 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.7□□□□□ -1.82
UBR3-208ENST00000474426 CXXC1Q9P0U4 656 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 ZSWIM5Q9P217 1185 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 APOBEC2Q9Y235 224 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 ARHGEF37A1IGU5 675 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SH3D21A4FU49 640 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 H3BQV1 296 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 XPO1O14980 1071 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 RAD51BO15315 384 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 KRT86O43790 486 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PRPSAP2O60256 369 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SEC22BO75396 215 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 RBBP9O75884 186 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ATP5HO75947 161 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 NPTXRO95502 500 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 OXSR1O95747 527 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 TFPTP0C1Z6 253 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PRKAR1AP10644 381 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 C6P13671 934 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 EDN3P14138 238 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 RABIFP47224 123 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CLCN6P51797 869 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CASP9P55211 416 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 FKBP4Q02790 459 aaKnown RBP eCLIP3.7□□□□□ -1.82
UBR3-208ENST00000474426 PLD1Q13393 1074 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 GALNT3Q14435 633 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 DPYSL2Q16555 572 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 KLHL38Q2WGJ6 581 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SPDYAQ5MJ70 313 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 RIC3Q7Z5B4 369 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CNTD1Q8N815 330 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SCAIQ8N9R8 606 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 UCMAQ8WVF2 138 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 EFHD2Q96C19 240 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 CDCA5Q96FF9 252 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 MYD88Q99836 296 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 WACQ9BTA9 647 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 MKNK1Q9BUB5 465 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 EDEM2Q9BV94 578 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ARHGAP39Q9C0H5 1083 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 KLHL4Q9C0H6 718 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SPACA1Q9HBV2 294 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 MAN1C1Q9NR34 630 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ABI2Q9NYB9 513 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 GRHPRQ9UBQ7 328 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 AASSQ9UDR5 926 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SNX6Q9UNH7 406 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 STX8Q9UNK0 236 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 GAB2Q9UQC2 676 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 VIRMAQ69YN4 1812 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms