RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 R3HCC1Q9Y3T6 440 aaKnown RBP21.85■■□□□ 1.09
CDHR3-210ENST00000474330 COL6A3P12111 3177 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 MEIS3P2A8K0S8 358 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 ZSCAN12O43309 604 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 LCA5LO95447 670 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 CYP3A5P20815 502 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 ANXA13P27216 316 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 POLR2BP30876 1174 aaKnown RBP21.84■■□□□ 1.09
CDHR3-210ENST00000474330 GUCY2FP51841 1108 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 KIF11P52732 1056 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 PLEKHG4Q58EX7 1191 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 AGMOQ6ZNB7 445 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 RTN4RL1Q86UN2 441 aaPredicted RBP21.84■■□□□ 1.09
CDHR3-210ENST00000474330 PGBD4Q96DM1 585 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 ARID3AQ99856 593 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 NIF3L1Q9GZT8 377 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 USP27XA6NNY8 438 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 AKR1B10O60218 316 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 ATF7P17544 494 aaPredicted RBP21.84■■□□□ 1.09
CDHR3-210ENST00000474330 ZNF571Q7Z3V5 609 aaPredicted RBP21.84■■□□□ 1.09
CDHR3-210ENST00000474330 ECHDC2Q86YB7 292 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 TMEM130Q8N3G9 435 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 C18orf25Q96B23 403 aaPredicted RBP21.84■■□□□ 1.09
CDHR3-210ENST00000474330 IL23AQ9NPF7 189 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 UBN1Q9NPG3 1134 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 TRMT1Q9NXH9 659 aaKnown RBP21.84■■□□□ 1.09
CDHR3-210ENST00000474330 TUBGCP4Q9UGJ1 667 aa21.84■■□□□ 1.09
CDHR3-210ENST00000474330 MICAL3Q7RTP6 2002 aa21.83■■□□□ 1.09
CDHR3-210ENST00000474330 C9IYK1 514 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 PTGESO14684 152 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 CLSTN1O94985 981 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 ACO1P21399 889 aaKnown RBP21.83■■□□□ 1.08
CDHR3-210ENST00000474330 KRT83P78385 493 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 ZNF667Q5HYK9 610 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 ZNF365Q70YC5 407 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 SLC24A5Q71RS6 500 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 ACRBPQ8NEB7 543 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 GSTCDQ8NEC7 633 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 LPPQ93052 612 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 ZFP42Q96MM3 310 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 CNTN6Q9UQ52 1028 aa21.83■■□□□ 1.08
CDHR3-210ENST00000474330 ANO9A1A5B4 782 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 OFD1O75665 1012 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 IPO7O95373 1038 aaKnown RBP21.82■■□□□ 1.08
CDHR3-210ENST00000474330 CXCL10P02778 98 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 RFC2P35250 354 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 CLCN1P35523 988 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 MLH1P40692 756 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 USP8P40818 1118 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 FAM189BP81408 668 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 WDR72Q3MJ13 1102 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 RASIP1Q5U651 963 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 ZNF598Q86UK7 904 aaKnown RBP21.82■■□□□ 1.08
CDHR3-210ENST00000474330 REXO1L1PQ8IX06 675 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 UBR7Q8N806 425 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 DBF4BQ8NFT6 615 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 LINC01599Q8WXQ3 324 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 SEPT8Q92599 483 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 APBB2Q92870 758 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 HPDLQ96IR7 371 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 PPP1R13BQ96KQ4 1090 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 PPP1R10Q96QC0 940 aaKnown RBP21.82■■□□□ 1.08
CDHR3-210ENST00000474330 GAD1Q99259 594 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 SYT11Q9BT88 431 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 TSPYL2Q9H2G4 693 aaPredicted RBP21.82■■□□□ 1.08
CDHR3-210ENST00000474330 RNF19AQ9NV58 838 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 REXO2Q9Y3B8 237 aaKnown RBP21.82■■□□□ 1.08
CDHR3-210ENST00000474330 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.82■■□□□ 1.08
CDHR3-210ENST00000474330 SCN1AP35498 2009 aa21.82■■□□□ 1.08
CDHR3-210ENST00000474330 CYP26A1O43174 497 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 EOMESO95936 686 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 ASPAP45381 313 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 SPA17Q15506 151 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 SLC18A3Q16572 532 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 GPR153Q6NV75 609 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 VPS36Q86VN1 386 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 LRRC52Q8N7C0 313 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 RNPC3Q96LT9 517 aaKnown RBP21.81■■□□□ 1.08
CDHR3-210ENST00000474330 RPS6KC1Q96S38 1066 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 RSAD1Q9HA92 442 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 SLC38A7Q9NVC3 462 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 ADAMTS1Q9UHI8 967 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 CHD9Q3L8U1 2897 aa21.81■■□□□ 1.08
CDHR3-210ENST00000474330 ARL5CA6NH57 179 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 PIRO00625 290 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 ZNF263O14978 683 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 GFPT1Q06210 699 aaPredicted RBP21.8■■□□□ 1.08
CDHR3-210ENST00000474330 MYO1EQ12965 1108 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 BMS1Q14692 1282 aaKnown RBP21.8■■□□□ 1.08
CDHR3-210ENST00000474330 C9orf57Q5W0N0 161 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 BCO2Q9BYV7 579 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 NXF1Q9UBU9 619 aaKnown RBP21.8■■□□□ 1.08
CDHR3-210ENST00000474330 A0A087X0T9 212 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 GOLGA6L9A6NEM1 432 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 THP07101 528 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 FAM228BP0C875 321 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 KRT5P13647 590 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 P4HA1P13674 534 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 LRPAP1P30533 357 aa21.8■■□□□ 1.08
CDHR3-210ENST00000474330 SOX4Q06945 474 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms