RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 NUB1Q9Y5A7 615 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 PCDHGC5Q9Y5F6 944 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 SMTNL1A8MU46 457 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 LGALS16A8MUM7 142 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 H3BNC9 293 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 EPHB6O15197 1021 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 P4HA2O15460 535 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 NOL4O94818 638 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
CASC3-204ENST00000474190 AFPP02771 609 aaKnown RBP11.16□□□□□ -0.62
CASC3-204ENST00000474190 TMEM191BP0C7N4 346 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 SLC9A1P19634 815 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 FGFR3P22607 806 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 IRS1P35568 1242 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 ASPAP45381 313 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 KLK7P49862 253 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 ERVFC1P60507 584 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 RBP5P82980 135 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 ADGRE1Q14246 886 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 GRIN2CQ14957 1233 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 NR1I3Q14994 352 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 RTP2Q5QGT7 225 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 PPP2R2DQ66LE6 453 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 FUT10Q6P4F1 479 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 DDX53Q86TM3 631 aaKnown RBP11.16□□□□□ -0.62
CASC3-204ENST00000474190 OSTM1Q86WC4 334 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 CACTINQ8WUQ7 758 aaKnown RBP11.16□□□□□ -0.62
CASC3-204ENST00000474190 KBTBD7Q8WVZ9 684 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 KAT5Q92993 513 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 TATDN2Q93075 761 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 ANKRD36BP1Q96IX9 119 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
CASC3-204ENST00000474190 ARID3AQ99856 593 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 PLVAPQ9BX97 442 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 MMRN2Q9H8L6 949 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 ALG13Q9NP73 1137 aaKnown RBP11.16□□□□□ -0.62
CASC3-204ENST00000474190 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 SPG21Q9NZD8 308 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 MSRAQ9UJ68 235 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 MTUS1Q9ULD2 1270 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 POLIQ9UNA4 740 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.16□□□□□ -0.62
CASC3-204ENST00000474190 XIRP2A4UGR9 3374 aa11.16□□□□□ -0.62
CASC3-204ENST00000474190 FSD2A1L4K1 749 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 GTPBP10A4D1E9 387 aaKnown RBP11.15□□□□□ -0.62
CASC3-204ENST00000474190 GABRDO14764 452 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 HCRTO43612 131 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 TNNC2P02585 160 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 CYP11A1P05108 521 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 RB1P06400 928 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 PON1P27169 355 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
CASC3-204ENST00000474190 CTNNB1P35222 781 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 ALDH7A1P49419 539 aaKnown RBP11.15□□□□□ -0.62
CASC3-204ENST00000474190 FANCCQ00597 558 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 ZNF697Q5TEC3 545 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 TCERG1LQ5VWI1 586 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 PHLDB3Q6NSJ2 640 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 ARHGEF19Q8IW93 802 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 EHBP1Q8NDI1 1231 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 FBXL13Q8NEE6 735 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 SENP8Q96LD8 212 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 KREMEN1Q96MU8 473 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 BCO2Q9BYV7 579 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 ZBP1Q9H171 429 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 VPS16Q9H269 839 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 ZNF576Q9H609 170 aa11.15□□□□□ -0.62
CASC3-204ENST00000474190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.621e-7■■■■■ 52.8
CASC3-204ENST00000474190 TIMM13Q9Y5L4 95 aaPredicted RBP11.15□□□□□ -0.62
CASC3-204ENST00000474190 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.15□□□□□ -0.62
CASC3-204ENST00000474190 TRIP11Q15643 1979 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 TMEM265A0A087WTH1 108 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 KPNA7A9QM74 516 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 ADAM12O43184 909 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 XPOTO43592 962 aaKnown RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 VNN2O95498 520 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 SOD2P04179 222 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 ACO1P21399 889 aaKnown RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 ATICP31939 592 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 MTIF2P46199 727 aaKnown RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 TAF6P49848 677 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 MYL7Q01449 175 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 DSG1Q02413 1049 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 BIRC3Q13489 604 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 PTPN14Q15678 1187 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 TPD52L1Q16890 204 aaPredicted RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 CCDC142Q17RM4 750 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 WSCD1Q658N2 575 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 GJB7Q6PEY0 223 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 TRIM65Q6PJ69 517 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 FAM114A1Q8IWE2 563 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 PDCL2Q8N4E4 241 aa11.14□□□□□ -0.63
CASC3-204ENST00000474190 LNX1Q8TBB1 728 aaPredicted RBP11.14□□□□□ -0.63
CASC3-204ENST00000474190 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms