RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 BTBD18B2RXH4 712 aa22.08■■□□□ 1.13
APP-215ENST00000474136 CTXN3Q4LDR2 81 aa22.08■■□□□ 1.13
APP-215ENST00000474136 XKR4Q5GH76 650 aa22.08■■□□□ 1.13
APP-215ENST00000474136 ATL3Q6DD88 541 aa22.08■■□□□ 1.13
APP-215ENST00000474136 IQCEQ6IPM2 695 aa22.08■■□□□ 1.13
APP-215ENST00000474136 ALKAL1Q6UXT8 129 aa22.08■■□□□ 1.13
APP-215ENST00000474136 GPIHBP1Q8IV16 184 aa22.08■■□□□ 1.13
APP-215ENST00000474136 ELMOD1Q8N336 334 aa22.08■■□□□ 1.13
APP-215ENST00000474136 FAM160A2Q8N612 972 aaPredicted RBP22.08■■□□□ 1.13
APP-215ENST00000474136 ZNF512Q96ME7 567 aaPredicted RBP22.08■■□□□ 1.13
APP-215ENST00000474136 TRPV4Q9HBA0 871 aa22.08■■□□□ 1.13
APP-215ENST00000474136 ARHGEF35A5YM69 484 aa22.07■■□□□ 1.12
APP-215ENST00000474136 SLC38A8A6NNN8 435 aa22.07■■□□□ 1.12
APP-215ENST00000474136 H7C4K7 107 aa22.07■■□□□ 1.12
APP-215ENST00000474136 SYN3O14994 580 aa22.07■■□□□ 1.12
APP-215ENST00000474136 TPGS2Q68CL5 300 aa22.07■■□□□ 1.12
APP-215ENST00000474136 LONP2Q86WA8 852 aa22.07■■□□□ 1.12
APP-215ENST00000474136 SHKBP1Q8TBC3 707 aa22.07■■□□□ 1.12
APP-215ENST00000474136 TRIP11Q15643 1979 aa22.07■■□□□ 1.12
APP-215ENST00000474136 GRM5P41594 1212 aa22.06■■□□□ 1.12
APP-215ENST00000474136 YARSP54577 528 aaKnown RBP22.06■■□□□ 1.12
APP-215ENST00000474136 EPHA5P54756 1037 aa22.06■■□□□ 1.12
APP-215ENST00000474136 RESTQ13127 1097 aa22.06■■□□□ 1.12
APP-215ENST00000474136 PPP2R5AQ15172 486 aa22.06■■□□□ 1.12
APP-215ENST00000474136 N4BP2L1Q5TBK1 243 aaPredicted RBP22.06■■□□□ 1.12
APP-215ENST00000474136 TXNDC11Q6PKC3 985 aa22.06■■□□□ 1.12
APP-215ENST00000474136 TTC8Q8TAM2 541 aa22.06■■□□□ 1.12
APP-215ENST00000474136 CSGALNACT1Q8TDX6 532 aa22.06■■□□□ 1.12
APP-215ENST00000474136 C18orf25Q96B23 403 aaPredicted RBP22.06■■□□□ 1.12
APP-215ENST00000474136 POLR3CQ9BUI4 534 aaPredicted RBP22.06■■□□□ 1.12
APP-215ENST00000474136 CDT1Q9H211 546 aa22.06■■□□□ 1.12
APP-215ENST00000474136 SLITRK6Q9H5Y7 841 aa22.06■■□□□ 1.12
APP-215ENST00000474136 ASAH2Q9NR71 780 aa22.06■■□□□ 1.12
APP-215ENST00000474136 TNFSF13BQ9Y275 285 aa22.06■■□□□ 1.12
APP-215ENST00000474136 NUB1Q9Y5A7 615 aa22.06■■□□□ 1.12
APP-215ENST00000474136 SDK1Q7Z5N4 2213 aa22.06■■□□□ 1.12
APP-215ENST00000474136 MCM7P33993 719 aa22.06■■□□□ 1.12
APP-215ENST00000474136 CNR2P34972 360 aa22.06■■□□□ 1.12
APP-215ENST00000474136 KPNA1P52294 538 aaPredicted RBP22.06■■□□□ 1.12
APP-215ENST00000474136 EFNA5P52803 228 aa22.06■■□□□ 1.12
APP-215ENST00000474136 LRRC32Q14392 662 aa22.06■■□□□ 1.12
APP-215ENST00000474136 SF3A2Q15428 464 aaKnown RBP22.06■■□□□ 1.12
APP-215ENST00000474136 CCDC6Q16204 474 aa22.06■■□□□ 1.12
APP-215ENST00000474136 RNF19BQ6ZMZ0 732 aa22.06■■□□□ 1.12
APP-215ENST00000474136 CEP68Q76N32 757 aa22.06■■□□□ 1.12
APP-215ENST00000474136 IFT74Q96LB3 600 aa22.06■■□□□ 1.12
APP-215ENST00000474136 CCDC94Q9BW85 323 aaPredicted RBP22.06■■□□□ 1.12
APP-215ENST00000474136 RXFP3Q9NSD7 469 aa22.06■■□□□ 1.12
APP-215ENST00000474136 SLC38A7Q9NVC3 462 aa22.06■■□□□ 1.12
APP-215ENST00000474136 AFF4Q9UHB7 1163 aaKnown RBP22.06■■□□□ 1.12
APP-215ENST00000474136 ANGPTL2Q9UKU9 493 aa22.06■■□□□ 1.12
APP-215ENST00000474136 PAPSS2O95340 614 aaPredicted RBP22.05■■□□□ 1.12
APP-215ENST00000474136 PMLP29590 882 aa22.05■■□□□ 1.12
APP-215ENST00000474136 FOXD4L5Q5VV16 416 aaPredicted RBP22.05■■□□□ 1.12
APP-215ENST00000474136 IL31Q6EBC2 164 aa22.05■■□□□ 1.12
APP-215ENST00000474136 CLEC17AQ6ZS10 378 aa22.05■■□□□ 1.12
APP-215ENST00000474136 YAF2Q8IY57 180 aa22.05■■□□□ 1.12
APP-215ENST00000474136 TMEM130Q8N3G9 435 aa22.05■■□□□ 1.12
APP-215ENST00000474136 FOXD4L4Q8WXT5 416 aaPredicted RBP22.05■■□□□ 1.12
APP-215ENST00000474136 ZNF396Q96N95 335 aaPredicted RBP22.05■■□□□ 1.12
APP-215ENST00000474136 GBP4Q96PP9 640 aa22.05■■□□□ 1.12
APP-215ENST00000474136 TOPORSQ9NS56 1045 aaPredicted RBP22.05■■□□□ 1.12
APP-215ENST00000474136 K7ERI5 159 aa22.04■■□□□ 1.12
APP-215ENST00000474136 AXIN1O15169 862 aa22.04■■□□□ 1.12
APP-215ENST00000474136 CHADO15335 359 aa22.04■■□□□ 1.12
APP-215ENST00000474136 MEFVO15553 781 aaPredicted RBP22.04■■□□□ 1.12
APP-215ENST00000474136 MLLT6P55198 1093 aaPredicted RBP22.04■■□□□ 1.12
APP-215ENST00000474136 ZNF568Q3ZCX4 644 aa22.04■■□□□ 1.12
APP-215ENST00000474136 AASDHQ4L235 1098 aaPredicted RBP22.04■■□□□ 1.12
APP-215ENST00000474136 STXBP5Q5T5C0 1151 aa22.04■■□□□ 1.12
APP-215ENST00000474136 ZNF280DQ6N043 979 aa22.04■■□□□ 1.12
APP-215ENST00000474136 APBB1IPQ7Z5R6 666 aaPredicted RBP22.04■■□□□ 1.12
APP-215ENST00000474136 DDX1Q92499 740 aaKnown RBP22.04■■□□□ 1.12
APP-215ENST00000474136 SUSD3Q96L08 255 aa22.04■■□□□ 1.12
APP-215ENST00000474136 ACO2Q99798 780 aaKnown RBP22.04■■□□□ 1.12
APP-215ENST00000474136 LRRC3Q9BY71 257 aa22.04■■□□□ 1.12
APP-215ENST00000474136 PTPRHQ9HD43 1115 aa22.04■■□□□ 1.12
APP-215ENST00000474136 CFAP45Q9UL16 551 aa22.04■■□□□ 1.12
APP-215ENST00000474136 NOL7Q9UMY1 257 aaKnown RBP22.04■■□□□ 1.12
APP-215ENST00000474136 YIPF1Q9Y548 306 aa22.04■■□□□ 1.12
APP-215ENST00000474136 A0A1W2PRU2 124 aa22.03■■□□□ 1.12
APP-215ENST00000474136 SPECC1L-ADORA2AF8WAN1 911 aa22.03■■□□□ 1.12
APP-215ENST00000474136 VNN2O95498 520 aa22.03■■□□□ 1.12
APP-215ENST00000474136 CPB1P15086 417 aa22.03■■□□□ 1.12
APP-215ENST00000474136 KCNE1P15382 129 aa22.03■■□□□ 1.12
APP-215ENST00000474136 RPA1P27694 616 aa22.03■■□□□ 1.12
APP-215ENST00000474136 MCM4P33991 863 aa22.03■■□□□ 1.12
APP-215ENST00000474136 TRAPPC10P48553 1259 aa22.03■■□□□ 1.12
APP-215ENST00000474136 ECM1Q16610 540 aa22.03■■□□□ 1.12
APP-215ENST00000474136 RILPL1Q5EBL4 403 aa22.03■■□□□ 1.12
APP-215ENST00000474136 LEMD2Q8NC56 503 aa22.03■■□□□ 1.12
APP-215ENST00000474136 DDX12PQ92771 950 aa22.03■■□□□ 1.12
APP-215ENST00000474136 ZFYVE19Q96K21 471 aa22.03■■□□□ 1.12
APP-215ENST00000474136 LRRC3BQ96PB8 259 aa22.03■■□□□ 1.12
APP-215ENST00000474136 ARRDC1-AS1Q9H2J1 176 aa22.03■■□□□ 1.12
APP-215ENST00000474136 C8orf33Q9H7E9 229 aaPredicted RBP22.03■■□□□ 1.12
APP-215ENST00000474136 RALGAPA1Q6GYQ0 2036 aa22.02■■□□□ 1.12
APP-215ENST00000474136 MYBPHLA2RUH7 354 aa22.02■■□□□ 1.12
APP-215ENST00000474136 TM4SF5O14894 197 aa22.02■■□□□ 1.12
APP-215ENST00000474136 CTHP32929 405 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms