RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 EBLN1P0CF75 366 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 ANXA11P50995 505 aaKnown RBP2.94□□□□□ -1.94
CCDC39-203ENST00000473854 SERINC3Q13530 473 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 DYRK1AQ13627 763 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 ERV3-1Q14264 604 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 HLXQ14774 488 aaPredicted RBP2.94□□□□□ -1.94
CCDC39-203ENST00000473854 TERF2Q15554 542 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 ZNF628Q5EBL2 1059 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 SLC29A4Q7RTT9 530 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 CNGA4Q8IV77 575 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 FOXP4Q8IVH2 680 aaPredicted RBP2.94□□□□□ -1.94
CCDC39-203ENST00000473854 NANOGP1Q8N7R0 232 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 SNX19Q92543 992 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 RAX2Q96IS3 184 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 TRNAU1APQ9NX07 287 aaKnown RBP2.94□□□□□ -1.94
CCDC39-203ENST00000473854 SH3BP4Q9P0V3 963 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 SMIM35A0A1B0GVV1 85 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 CDHR4A6H8M9 788 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 TISP43B9A030 160 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 PRRT4C9JH25 899 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 NDUFB7P17568 137 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 SLFN5Q08AF3 891 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 LRRC41Q15345 812 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 SEPT7Q16181 437 aaKnown RBP2.93□□□□□ -1.94
CCDC39-203ENST00000473854 GSG1LQ6UXU4 331 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 TSHZ1Q6ZSZ6 1077 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 UBE3BQ7Z3V4 1068 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 LILRB2Q8N423 598 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 TBC1D15Q8TC07 691 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 MKL1Q969V6 931 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 CYFIP2Q96F07 1278 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 EHD3Q9NZN3 535 aa2.93□□□□□ -1.94
CCDC39-203ENST00000473854 E7ENX8 843 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 RFPL3O75679 317 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 DNAJB5O75953 348 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 NXPH3O95157 252 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 NR2F6P10588 404 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 TGFB3P10600 412 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 FCER1AP12319 257 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 PPP3CBP16298 524 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 ATP2B1P20020 1258 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 SFPQP23246 707 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 GATA3P23771 443 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 HTRA4P83105 476 aaPredicted RBP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 TAP2Q03519 686 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 BMPR2Q13873 1038 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 NPY5RQ15761 445 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 TEDDM1Q5T9Z0 273 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 CATSPERGQ6ZRH7 1159 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 C18orf65Q6ZTR6 163 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 Q6ZVL8 140 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 ZNF551Q7Z340 670 aaPredicted RBP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 ADHFE1Q8IWW8 467 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 ADGRG5Q8IZF4 528 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 FANCBQ8NB91 859 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 THOC3Q96J01 351 aaKnown RBP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 VCPIP1Q96JH7 1222 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 CTAGE1Q96RT6 745 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 SRPK1Q96SB4 655 aaKnown RBP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 GSTO2Q9H4Y5 243 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 RBM12Q9NTZ6 932 aaKnown RBP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 SLC23A1Q9UHI7 598 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 AJAP1Q9UKB5 411 aaPredicted RBP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 PROCRQ9UNN8 238 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 ICKQ9UPZ9 632 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 NOC2LQ9Y3T9 749 aaKnown RBP2.92□□□□□ -1.94
CCDC39-203ENST00000473854 NR2E3Q9Y5X4 410 aa2.92□□□□□ -1.94
CCDC39-203ENST00000473854 E5RJQ4 531 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 HAUS5O94927 633 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 LPLP06858 475 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 ZFXP17010 805 aaPredicted RBP2.91□□□□□ -1.94
CCDC39-203ENST00000473854 ARHGAP25P42331 645 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 LSSP48449 732 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 CREMQ03060 361 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 PIGFQ07326 219 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 GTF2H3Q13889 308 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 DAZAP2Q15038 168 aaPredicted RBP2.91□□□□□ -1.94
CCDC39-203ENST00000473854 UGT8Q16880 541 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 AARS2Q5JTZ9 985 aaKnown RBP2.91□□□□□ -1.94
CCDC39-203ENST00000473854 LVRNQ6Q4G3 990 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 IRF2BP2Q7Z5L9 587 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 NXPE1Q8N323 547 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 SMC1BQ8NDV3 1235 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 FATE1Q969F0 183 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 ACAP3Q96P50 834 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 GREM2Q9H772 168 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 SERTAD4Q9NUC0 356 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 MDFICQ9P1T7 246 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 ZBTB21Q9ULJ3 1066 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.91□□□□□ -1.94
CCDC39-203ENST00000473854 ADGRA2Q96PE1 1338 aa2.91□□□□□ -1.94
CCDC39-203ENST00000473854 CCDC195A0A1B0GUA6 201 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 ZNF891A8MT65 544 aaPredicted RBP2.9□□□□□ -1.95
CCDC39-203ENST00000473854 SMIM22K7EJ46 135 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 TOR1BO14657 336 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 ADAMTS3O15072 1205 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 GPR32O75388 356 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 ALPLP05186 524 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 FAM163BP0C2L3 166 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms