RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 CCDC192P0DO97 292 aa17.81■□□□□ 0.44
HPS4-210ENST00000473782 GCFC2P16383 781 aaKnown RBP17.81■□□□□ 0.44
HPS4-210ENST00000473782 PRPF4BQ13523 1007 aaKnown RBP17.81■□□□□ 0.44
HPS4-210ENST00000473782 GALNT17Q6IS24 598 aa17.81■□□□□ 0.44
HPS4-210ENST00000473782 RNF19BQ6ZMZ0 732 aa17.81■□□□□ 0.44
HPS4-210ENST00000473782 YAF2Q8IY57 180 aa17.81■□□□□ 0.44
HPS4-210ENST00000473782 LEMD2Q8NC56 503 aa17.81■□□□□ 0.44
HPS4-210ENST00000473782 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
HPS4-210ENST00000473782 TRIP11Q15643 1979 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 BCLAF3A2AJT9 711 aaKnown RBP17.8■□□□□ 0.44
HPS4-210ENST00000473782 SYN3O14994 580 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 CEACAM1P13688 526 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 CSRP1P21291 193 aaKnown RBP17.8■□□□□ 0.44
HPS4-210ENST00000473782 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
HPS4-210ENST00000473782 NT5DC1Q5TFE4 455 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 FSTL4Q6MZW2 842 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 GAREM2Q75VX8 874 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 BEST2Q8NFU1 509 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 OXER1Q8TDS5 423 aa17.8■□□□□ 0.44
HPS4-210ENST00000473782 JAKMIP1Q96N16 626 aaKnown RBP17.8■□□□□ 0.44
HPS4-210ENST00000473782 FAM205CA6NFA0 338 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 OTOL1A6NHN0 477 aaPredicted RBP17.79■□□□□ 0.44
HPS4-210ENST00000473782 PODXLO00592 558 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 MEFVO15553 781 aaPredicted RBP17.79■□□□□ 0.44
HPS4-210ENST00000473782 DEXIO95424 95 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 CAVIN2O95810 425 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 RPS6KB1P23443 525 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 CTXN3Q4LDR2 81 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 ARHGAP29Q52LW3 1261 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 SOWAHCQ53LP3 525 aaPredicted RBP17.79■□□□□ 0.44
HPS4-210ENST00000473782 TMEM196Q5HYL7 178 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 ELMOD1Q8N336 334 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 CEP120Q8N960 986 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 TMEM209Q96SK2 561 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 SLITRK6Q9H5Y7 841 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 MAFFQ9ULX9 164 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 YIPF1Q9Y548 306 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 SNX14Q9Y5W7 946 aa17.79■□□□□ 0.44
HPS4-210ENST00000473782 ASH1LQ9NR48 2969 aaKnown RBP17.78■□□□□ 0.44
HPS4-210ENST00000473782 H7C4K7 107 aa17.78■□□□□ 0.44
HPS4-210ENST00000473782 PRAMEF12O95522 483 aa17.78■□□□□ 0.44
HPS4-210ENST00000473782 SPATA31C1P0DKV0 1188 aa17.78■□□□□ 0.44
HPS4-210ENST00000473782 ZBTB8OSQ8IWT0 167 aa17.78■□□□□ 0.44
HPS4-210ENST00000473782 FAM177A1Q8N128 213 aaPredicted RBP17.78■□□□□ 0.44
HPS4-210ENST00000473782 TMEM130Q8N3G9 435 aa17.78■□□□□ 0.44
HPS4-210ENST00000473782 ADPGKQ9BRR6 497 aa17.78■□□□□ 0.44
HPS4-210ENST00000473782 FBRSL1Q9HCM7 1045 aaKnown RBP17.78■□□□□ 0.44
HPS4-210ENST00000473782 CACNA1EQ15878 2313 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 HYAL3O43820 417 aaPredicted RBP17.77■□□□□ 0.44
HPS4-210ENST00000473782 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
HPS4-210ENST00000473782 CREB5Q02930 508 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 TOB2Q14106 344 aaPredicted RBP17.77■□□□□ 0.44
HPS4-210ENST00000473782 MAPK6Q16659 721 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 DCAF4L1Q3SXM0 396 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 DAB2IPQ5VWQ8 1189 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 BLOC1S2Q6QNY1 142 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 PIK3AP1Q6ZUJ8 805 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 SLFN12Q8IYM2 578 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 TRIM22Q8IYM9 498 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 CAMKK1Q8N5S9 505 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 SUSD3Q96L08 255 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 HHIPQ96QV1 700 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 KIFC3Q9BVG8 833 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 OBP2AQ9NY56 170 aa17.77■□□□□ 0.44
HPS4-210ENST00000473782 ATG2BQ96BY7 2078 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 HELZ2Q9BYK8 2649 aaKnown RBP17.76■□□□□ 0.43
HPS4-210ENST00000473782 KIF26AQ9ULI4 1882 aaPredicted RBP17.76■□□□□ 0.43
HPS4-210ENST00000473782 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 PATE3B3GLJ2 98 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 KIAA1211LQ6NV74 962 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 FAM200AQ8TCP9 573 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 DDX12PQ92771 950 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 C18orf25Q96B23 403 aaPredicted RBP17.76■□□□□ 0.43
HPS4-210ENST00000473782 C2orf40Q9H1Z8 148 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 HPS4Q9NQG7 708 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 KLK13Q9UKR3 277 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 SLC8A2Q9UPR5 921 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 MSRB2Q9Y3D2 182 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 NEUROG3Q9Y4Z2 214 aa17.76■□□□□ 0.43
HPS4-210ENST00000473782 ASCC3Q8N3C0 2202 aaKnown RBP17.76■□□□□ 0.43
HPS4-210ENST00000473782 ABCA7Q8IZY2 2146 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 WNT7AO00755 349 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 TRDMT1O14717 391 aaKnown RBP17.75■□□□□ 0.43
HPS4-210ENST00000473782 EGFP01133 1207 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 OR4Q2P0C623 313 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 LIG1P18858 919 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 WEE1P30291 646 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 ATF7IP2Q5U623 682 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 NAIF1Q69YI7 327 aaPredicted RBP17.75■□□□□ 0.43
HPS4-210ENST00000473782 MCPH1Q8NEM0 835 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 DEFB124Q8NES8 71 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 EZH1Q92800 747 aaPredicted RBP17.75■□□□□ 0.43
HPS4-210ENST00000473782 FAM83CQ9BQN1 747 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 POLD4Q9HCU8 107 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 PTPRHQ9HD43 1115 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 PCDHA12Q9UN75 941 aa17.75■□□□□ 0.43
HPS4-210ENST00000473782 PCNX2A6NKB5 2137 aa17.74■□□□□ 0.43
HPS4-210ENST00000473782 MARCH6O60337 910 aa17.74■□□□□ 0.43
HPS4-210ENST00000473782 DTNBO60941 627 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms