RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	GSTM1	P09488	218 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	PARP1	P09874	1014 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	SRGN	P10124	158 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	SMARCA1	P28370	1054 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CTSK	P43235	329 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	PMS1	P54277	932 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	HERVK_113	P62684	666 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	RACK1	P63244	317 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	KRT83	P78385	493 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ZBED6	P86452	979 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CKAP4	Q07065	602 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	PPARA	Q07869	468 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	PAK1	Q13153	545 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ORC2	Q13416	577 aa	Predicted RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	GNL2	Q13823	731 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	RASGRF1	Q13972	1273 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	KCNJ12	Q14500	433 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	KARS	Q15046	597 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CDSN	Q15517	529 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	IL17A	Q16552	155 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	PFKFB3	Q16875	520 aa	Predicted RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	MAP9	Q49MG5	647 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ZNF394	Q53GI3	561 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	GLE1	Q53GS7	698 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TAF7L	Q5H9L4	462 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	FBXW10	Q5XX13	1052 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ALS2CL	Q60I27	953 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CRTC3	Q6UUV7	619 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	LEKR1	Q6ZMV7	388 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	GBP6	Q6ZN66	633 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TOM1L2	Q6ZVM7	507 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TMTC3	Q6ZXV5	915 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	RPAIN	Q86UA6	219 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	SLCO6A1	Q86UG4	719 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	MICU3	Q86XE3	530 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CD302	Q8IX05	232 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	AMOTL1	Q8IY63	956 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TAB3	Q8N5C8	712 aa	Predicted RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	PDILT	Q8N807	584 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	MB21D1	Q8N884	522 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ENAH	Q8N8S7	591 aa	Predicted RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	NOA1	Q8NC60	698 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	GIMAP8	Q8ND71	665 aa	Predicted RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ANKRD20A12P	Q8NF67	263 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CCDC148	Q8NFR7	591 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	NEK11	Q8NG66	645 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	IPO4	Q8TEX9	1081 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	AEN	Q8WTP8	325 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ESR2	Q92731	530 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CAVIN3	Q969G5	261 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	RNF34	Q969K3	372 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	EPSTI1	Q96J88	318 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TM9SF2	Q99805	663 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	C7orf25	Q9BPX7	421 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	RIOK1	Q9BRS2	568 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	DESI2	Q9BSY9	194 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	FAM107B	Q9H098	131 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TAF1D	Q9H5J8	278 aa	Predicted RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	PDE11A	Q9HCR9	933 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TNFRSF12A	Q9NP84	129 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CABP5	Q9NP86	173 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	INCENP	Q9NQS7	918 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ERVK13-1	Q9NX77	482 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	RNF14	Q9UBS8	474 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	HPCAL4	Q9UM19	191 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	FAN1	Q9Y2M0	1017 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	SF3B6	Q9Y3B4	125 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	RRP15	Q9Y3B9	282 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TNFRSF18	Q9Y5U5	241 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	SAR1B	Q9Y6B6	198 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	DDX60L	Q5H9U9	1706 aa	Known RBP	4	□□□□□ -1.77
CSMD2-208	ENST00000471438	DOT1L	Q8TEK3	1739 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	TRPM7	Q96QT4	1865 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	CENPF	P49454	3210 aa		4	□□□□□ -1.77
CSMD2-208	ENST00000471438	ATP8B3	O60423	1300 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	NAV1	Q8NEY1	1877 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	PCSK5	Q92824	1860 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438		A0A087WUV0	522 aa	Predicted RBP	3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438		A0A0U1RQJ8	604 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	TTC26	A0AVF1	554 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	CES2	O00748	559 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	KRT86	O43790	486 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	IDH1	O75874	414 aa	Known RBP	3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	DDN	O94850	711 aa	Predicted RBP	3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	MBD4	O95243	580 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	RPN1	P04843	607 aa	Known RBP	3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	APP	P05067	770 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	MMP10	P09238	476 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	RXRA	P19793	462 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	CCNE1	P24864	410 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	CALML3	P27482	149 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	KRT9	P35527	623 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	PRCP	P42785	496 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	NOV	P48745	357 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	MAPKAPK2	P49137	400 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	EIF5	P55010	431 aa	Known RBP	3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	INHBE	P58166	350 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	APBA1	Q02410	837 aa		3.99	□□□□□ -1.77
CSMD2-208	ENST00000471438	NOG	Q13253	232 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms