RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ZDHHC9Q9Y397 364 aa9.78□□□□□ -0.84
SYNGAP1-205ENST00000470232 PDCD11Q14690 1871 aaKnown RBP9.78□□□□□ -0.84
SYNGAP1-205ENST00000470232 DMXL2Q8TDJ6 3036 aa9.77□□□□□ -0.84
SYNGAP1-205ENST00000470232 LRRIQ4A6NIV6 560 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 ESPNB1AK53 854 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 SYN3O14994 580 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 KHNYNO15037 678 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 RECQL4O94761 1208 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 MBD3O95983 291 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 IFNAR1P17181 557 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 SPINK2P20155 84 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 GLRA2P23416 452 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 CCR2P41597 374 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 SOX9P48436 509 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 CLCNKBP51801 687 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 AMPD2Q01433 879 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 FCHO2Q0JRZ9 810 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 TWF1Q12792 350 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 GRSF1Q12849 480 aaKnown RBP eCLIP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 PLD1Q13393 1074 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 CCINQ13939 588 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 CTTNQ14247 550 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 NAB2Q15742 525 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 UPP1Q16831 310 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 FAM187BQ17R55 369 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 ZSCAN23Q3MJ62 389 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 PLK5Q496M5 336 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 NCAPH2Q6IBW4 605 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 C11orf74Q86VG3 221 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 SLFN12Q8IYM2 578 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 HS6ST3Q8IZP7 471 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 INTS4Q96HW7 963 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 NAP1L5Q96NT1 182 aaPredicted RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 TMEM209Q96SK2 561 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 SMOC1Q9H4F8 434 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 TMEM9BQ9NQ34 198 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 XPNPEP1Q9NQW7 623 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 THG1LQ9NWX6 298 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 OBP2AQ9NY56 170 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 RGL1Q9NZL6 768 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 WRAP73Q9P2S5 460 aaPredicted RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 WASF3Q9UPY6 502 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 NEUROG3Q9Y4Z2 214 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 VWA8A3KMH1 1905 aa9.77□□□□□ -0.85
SYNGAP1-205ENST00000470232 CCDC194A0A1B0GVG4 234 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 BCLAF3A2AJT9 711 aaKnown RBP9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 EIF4E1BA6NMX2 242 aaKnown RBP9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 ZBTB39O15060 712 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 EXTL3O43909 919 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 SLITRK3O94933 977 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 SEC24AO95486 1093 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 FGF19O95750 216 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 PXNP49023 591 aaPredicted RBP9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 EPHA5P54756 1037 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 CYP4A11Q02928 519 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 SSRP1Q08945 709 aaKnown RBP9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 PRPF4BQ13523 1007 aaKnown RBP9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 TEAD2Q15562 447 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 MAPK6Q16659 721 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 INF2Q27J81 1249 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 DCAF4L1Q3SXM0 396 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 Q6ZUG5 572 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 NOSTRINQ8IVI9 506 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 APPL2Q8NEU8 664 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 BRF1Q92994 677 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 PPP1R9BQ96SB3 815 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 POLR3FQ9H1D9 316 aaPredicted RBP9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 DUSP15Q9H1R2 295 aaPredicted RBP9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 FZD8Q9H461 694 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 KCNMB3Q9NPA1 279 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 SLC38A7Q9NVC3 462 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 GDAQ9Y2T3 454 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 MSRB2Q9Y3D2 182 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 IGF2RP11717 2491 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 COL4A2P08572 1712 aa9.76□□□□□ -0.85
SYNGAP1-205ENST00000470232 H0Y626 953 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 NRG2O14511 850 aaPredicted RBP9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 SLC37A4O43826 429 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 MOSPD3O75425 235 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 TRIM16O95361 564 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 LYPLA2O95372 231 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 GJA1P17302 382 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 MARCKSP29966 332 aaPredicted RBP9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 HSPA4P34932 840 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 BRCC3P46736 316 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 YARSP54577 528 aaKnown RBP9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 EPHB3P54753 998 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 NTRK3Q16288 839 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 ITPRIPL2Q3MIP1 535 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 CTXN3Q4LDR2 81 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 ARHGAP15Q53QZ3 475 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 TCEAL6Q6IPX3 200 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 ZNF280DQ6N043 979 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 TXNDC11Q6PKC3 985 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 NEK8Q86SG6 692 aa9.75□□□□□ -0.85
SYNGAP1-205ENST00000470232 ARID3BQ8IVW6 561 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms