RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 NT5DC4Q86YG4 428 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 E2F7Q96AV8 911 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 RPP25Q9BUL9 199 aaKnown RBP11.92□□□□□ -0.5
COL4A3-204ENST00000469504 BCO2Q9BYV7 579 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 ASB7Q9H672 318 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 ZFP14Q9HCL3 533 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 TRPV5Q9NQA5 729 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 ASAH2Q9NR71 780 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 SEL1LQ9UBV2 794 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 TUBGCP4Q9UGJ1 667 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 CPSF3Q9UKF6 684 aaKnown RBP11.92□□□□□ -0.5
COL4A3-204ENST00000469504 C2CD2Q9Y426 696 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 STYXL1Q9Y6J8 313 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 CITO14578 2027 aa11.92□□□□□ -0.5
COL4A3-204ENST00000469504 RIF1Q5UIP0 2472 aaKnown RBP11.91□□□□□ -0.5
COL4A3-204ENST00000469504 NPHP3-ACAD11A0A0J9YXS1 232 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 LACTBL1A8MY62 500 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 FGF19O95750 216 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 ODC1P11926 461 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 ARPP19P56211 112 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 SMARCB1Q12824 385 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 GPR17Q13304 367 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
COL4A3-204ENST00000469504 MCM6Q14566 821 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 KARSQ15046 597 aaKnown RBP11.91□□□□□ -0.5
COL4A3-204ENST00000469504 POSTNQ15063 836 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
COL4A3-204ENST00000469504 SLC5A9Q2M3M2 681 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 C1orf228Q6PIY5 440 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 DSTYKQ6XUX3 929 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 DEPDC1BQ8WUY9 529 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 IRF7Q92985 503 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 FIZ1Q96SL8 496 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 CORO1BQ9BR76 489 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 IER2Q9BTL4 223 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 MSTO1Q9BUK6 570 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 HAPLN2Q9GZV7 340 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 TRPV4Q9HBA0 871 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 FBXO4Q9UKT5 387 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 DSEQ9UL01 958 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 ASB3Q9Y575 518 aa11.91□□□□□ -0.5
COL4A3-204ENST00000469504 PTPRZ1P23471 2315 aaPredicted RBP11.91□□□□□ -0.5
COL4A3-204ENST00000469504 MAN2B1O00754 1011 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 SEC24AO95486 1093 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 LMNAP02545 664 aaKnown RBP11.9□□□□□ -0.5
COL4A3-204ENST00000469504 DCNP07585 359 aaKnown RBP11.9□□□□□ -0.5
COL4A3-204ENST00000469504 GLULP15104 373 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 GAP43P17677 238 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 TNFSF9P41273 254 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.5
COL4A3-204ENST00000469504 EPHB3P54753 998 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 MLLT6P55198 1093 aaPredicted RBP11.9□□□□□ -0.5
COL4A3-204ENST00000469504 LILRA4P59901 499 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 FOXK2Q01167 660 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 TWF1Q12792 350 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 ALCAMQ13740 583 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 DHX8Q14562 1220 aaKnown RBP11.9□□□□□ -0.5
COL4A3-204ENST00000469504 SEZ6Q53EL9 994 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 ZBTB41Q5SVQ8 909 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 OVOS1Q6IE37 1185 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 ARMCX5Q6P1M9 558 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 ZNF852Q6ZMS4 543 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 ING5Q8WYH8 240 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 SMARCD2Q92925 531 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 MCRS1Q96EZ8 462 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 MSANTD3Q96H12 275 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 INTS4Q96HW7 963 aaKnown RBP11.9□□□□□ -0.5
COL4A3-204ENST00000469504 ASB16Q96NS5 453 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 KXD1Q9BQD3 176 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 ZHX3Q9H4I2 956 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 LTB4R2Q9NPC1 389 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 EXOC7Q9UPT5 735 aa11.9□□□□□ -0.5
COL4A3-204ENST00000469504 SRPRBQ9Y5M8 271 aaKnown RBP11.9□□□□□ -0.5
COL4A3-204ENST00000469504 FAM186AA6NE01 2351 aa11.9□□□□□ -0.51
COL4A3-204ENST00000469504 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 VPS37CA5D8V6 355 aaPredicted RBP11.89□□□□□ -0.51
COL4A3-204ENST00000469504 PIRO00625 290 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 CYP11A1P05108 521 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 CEBPBP17676 345 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 PSMC3P17980 439 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 ALDH1A3P47895 512 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 TMEM132DQ14C87 1099 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 SPECC1Q5M775 1068 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 ADALQ6DHV7 355 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 JADE1Q6IE81 842 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 RNF19BQ6ZMZ0 732 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 CCDC73Q6ZRK6 1079 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 ZNF720Q7Z2F6 126 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 ITIH5Q86UX2 942 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
COL4A3-204ENST00000469504 CLDN23Q96B33 292 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 TRMT61BQ9BVS5 477 aaKnown RBP11.89□□□□□ -0.51
COL4A3-204ENST00000469504 FOXQ1Q9C009 403 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 ZSCAN16Q9H4T2 348 aaPredicted RBP11.89□□□□□ -0.51
COL4A3-204ENST00000469504 CEP72Q9P209 647 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 ZMYM5Q9UJ78 669 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 AGO2Q9UKV8 859 aaKnown RBP11.89□□□□□ -0.51
COL4A3-204ENST00000469504 YIPF1Q9Y548 306 aa11.89□□□□□ -0.51
COL4A3-204ENST00000469504 MYH11P35749 1972 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms