RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ACOT2P49753 483 aa15.68■□□□□ 0.1
COL27A1-203ENST00000468565 ZNF165P49910 485 aa15.68■□□□□ 0.1
COL27A1-203ENST00000468565 VARS2Q5ST30 1063 aaKnown RBP15.68■□□□□ 0.1
COL27A1-203ENST00000468565 SPATA1Q5VX52 437 aa15.68■□□□□ 0.1
COL27A1-203ENST00000468565 STXBP4Q6ZWJ1 553 aa15.68■□□□□ 0.1
COL27A1-203ENST00000468565 ZDHHC14Q8IZN3 488 aa15.68■□□□□ 0.1
COL27A1-203ENST00000468565 C7orf25Q9BPX7 421 aa15.68■□□□□ 0.1
COL27A1-203ENST00000468565 CDY1Q9Y6F8 540 aa15.68■□□□□ 0.1
COL27A1-203ENST00000468565 PRR33A8MZF0 331 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 SP100P23497 879 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 HOXA9P31269 272 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 OR1D2P34982 312 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 ASIC1P78348 528 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 MRPL58Q14197 206 aaKnown RBP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 LIN9Q5TKA1 542 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 JADE1Q6IE81 842 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 SLC8B1Q6J4K2 584 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 RSPO2Q6UXX9 243 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 RTL10Q7L3V2 364 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 OTOP3Q7RTS5 596 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 SYCP3Q8IZU3 236 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 FMR1NBQ8N0W7 255 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 APPL2Q8NEU8 664 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 BEST2Q8NFU1 509 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 SPDYE1Q8NFV5 336 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 SMG7Q92540 1137 aaKnown RBP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 EDAQ92838 391 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 FAM212AQ96EL1 285 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 FGFBP2Q9BYJ0 223 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 PRKD2Q9BZL6 878 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 DNAJC25Q9H1X3 360 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 IKZF4Q9H2S9 585 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 WDR6Q9NNW5 1121 aaKnown RBP15.67■□□□□ 0.1
COL27A1-203ENST00000468565 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 C2CD2Q9Y426 696 aa15.67■□□□□ 0.1
COL27A1-203ENST00000468565 FAM86C2PA6NEL3 165 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 H7C4K7 107 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 M0QZQ0 153 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 LDHAP00338 332 aaKnown RBP15.66■□□□□ 0.1
COL27A1-203ENST00000468565 HNRNPA1P09651 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL27A1-203ENST00000468565 GARTP22102 1010 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 PAX3P23760 479 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 PTPN21Q16825 1174 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 CRELD2Q6UXH1 353 aaPredicted RBP15.66■□□□□ 0.1
COL27A1-203ENST00000468565 ACSF2Q96CM8 615 aaPredicted RBP15.66■□□□□ 0.1
COL27A1-203ENST00000468565 ANO10Q9NW15 660 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 CLUHO75153 1309 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 NOTCH4Q99466 2003 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 AP5Z1O43299 807 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 TBC1D4O60343 1298 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 PRPF6O94906 941 aaKnown RBP15.66■□□□□ 0.1
COL27A1-203ENST00000468565 IL18RAPO95256 599 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 POU2F2P09086 479 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 ZXDAP98168 799 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 TMEM132DQ14C87 1099 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 UNC13DQ70J99 1090 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 NT5DC4Q86YG4 428 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 PIDD1Q9HB75 910 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 KCNH3Q9ULD8 1083 aa15.66■□□□□ 0.1
COL27A1-203ENST00000468565 TRIOO75962 3097 aa15.65■□□□□ 0.1
COL27A1-203ENST00000468565 GOLGA6L19H0YKK7 550 aa15.65■□□□□ 0.1
COL27A1-203ENST00000468565 EIF3DO15371 548 aaKnown RBP eCLIP15.65■□□□□ 0.11e-7■■□□□ 13
COL27A1-203ENST00000468565 C8AP07357 584 aa15.65■□□□□ 0.1
COL27A1-203ENST00000468565 NFICP08651 508 aa15.65■□□□□ 0.1
COL27A1-203ENST00000468565 PPM1LQ5SGD2 360 aa15.65■□□□□ 0.1
COL27A1-203ENST00000468565 ZNF280DQ6N043 979 aa15.65■□□□□ 0.1
COL27A1-203ENST00000468565 UBE4BO95155 1302 aa15.65■□□□□ 0.1
COL27A1-203ENST00000468565 KIAA0391O15091 583 aaKnown RBP15.64■□□□□ 0.09
COL27A1-203ENST00000468565 CMA1P23946 247 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 GUCY2FP51841 1108 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 ROR1Q01973 937 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 EHHADHQ08426 723 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.64■□□□□ 0.09
COL27A1-203ENST00000468565 BRSK2Q8IWQ3 736 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 CEP57L1Q8IYX8 460 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 TMEM130Q8N3G9 435 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 ZNF461Q8TAF7 563 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 OXCT2Q9BYC2 517 aaPredicted RBP15.64■□□□□ 0.09
COL27A1-203ENST00000468565 A0A1B0GVL5 298 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 PVALEFA0A1B0GWK0 134 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 ANO9A1A5B4 782 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 PIRO00625 290 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 ABLIM3O94929 683 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 SLFN14P0C7P3 912 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 COL9A1P20849 921 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 NDUFA8P51970 172 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 FAM26FQ5R3K3 315 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 EPM2AIP1Q7L775 607 aaPredicted RBP15.64■□□□□ 0.09
COL27A1-203ENST00000468565 SLC7A14Q8TBB6 771 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 FAM213AQ9BRX8 229 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 ZMYND15Q9H091 742 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 NAT10Q9H0A0 1025 aaKnown RBP15.64■□□□□ 0.09
COL27A1-203ENST00000468565 FBXL5Q9UKA1 691 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 SORCS3Q9UPU3 1222 aa15.64■□□□□ 0.09
COL27A1-203ENST00000468565 EXTL3O43909 919 aa15.63■□□□□ 0.09
COL27A1-203ENST00000468565 XYLBO75191 536 aa15.63■□□□□ 0.09
COL27A1-203ENST00000468565 OAZ2O95190 189 aa15.63■□□□□ 0.09
COL27A1-203ENST00000468565 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms