RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 TMC2Q8TDI7 906 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 PARD3BQ8TEW8 1205 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 BORCS6Q96GS4 357 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 DHTKD1Q96HY7 919 aaPredicted RBP21.62■■□□□ 1.05
NPHP4-206ENST00000468253 BARX2Q9UMQ3 279 aaPredicted RBP21.62■■□□□ 1.05
NPHP4-206ENST00000468253 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 PPEF2O14830 753 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 PAPLNO95428 1278 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 GLUD1P00367 558 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 TMEM191BP0C7N4 346 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 EPCAMP16422 314 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 RBM10P98175 930 aaKnown RBP21.61■■□□□ 1.05
NPHP4-206ENST00000468253 ITIH3Q06033 890 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 SMAD4Q13485 552 aaKnown RBP21.61■■□□□ 1.05
NPHP4-206ENST00000468253 STIM1Q13586 685 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 PTCRAQ6ISU1 281 aaPredicted RBP21.61■■□□□ 1.05
NPHP4-206ENST00000468253 SLC8B1Q6J4K2 584 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 LLGL2Q6P1M3 1020 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 SYCE2Q6PIF2 218 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 CYP26C1Q6V0L0 522 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 SMYD4Q8IYR2 804 aaPredicted RBP21.61■■□□□ 1.05
NPHP4-206ENST00000468253 SENP8Q96LD8 212 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 CGRRF1Q99675 332 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 DSEQ9UL01 958 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 AGAP1Q9UPQ3 857 aa21.61■■□□□ 1.05
NPHP4-206ENST00000468253 IKBKBO14920 756 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 SPTLC1O15269 473 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 TGM5O43548 720 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 CYP11A1P05108 521 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 TNNI1P19237 187 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 NR2F2P24468 414 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 SV2CQ496J9 727 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 TRAPPC11Q7Z392 1133 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 USP37Q86T82 979 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 TMEM130Q8N3G9 435 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 CMASQ8NFW8 434 aaPredicted RBP21.6■■□□□ 1.05
NPHP4-206ENST00000468253 OR5B17Q8NGF7 314 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 CCDC127Q96BQ5 260 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 ZNF560Q96MR9 790 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 RHOBTB2Q9BYZ6 727 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 GZF1Q9H116 711 aaPredicted RBP21.6■■□□□ 1.05
NPHP4-206ENST00000468253 ADAM7Q9H2U9 754 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 MAFFQ9ULX9 164 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 R3HCC1Q9Y3T6 440 aaKnown RBP21.6■■□□□ 1.05
NPHP4-206ENST00000468253 UNC80Q8N2C7 3258 aa21.6■■□□□ 1.05
NPHP4-206ENST00000468253 KPNA7A9QM74 516 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 MBTPS2O43462 519 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 ITGB3P05106 788 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 DLATP10515 647 aaKnown RBP21.59■■□□□ 1.05
NPHP4-206ENST00000468253 RPL17P18621 184 aaKnown RBP21.59■■□□□ 1.05
NPHP4-206ENST00000468253 OR1D2P34982 312 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 PSMC2P35998 433 aaKnown RBP21.59■■□□□ 1.05
NPHP4-206ENST00000468253 CASP4P49662 377 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 FKBP3Q00688 224 aaKnown RBP21.59■■□□□ 1.05
NPHP4-206ENST00000468253 YWHAHQ04917 246 aaPredicted RBP21.59■■□□□ 1.05
NPHP4-206ENST00000468253 LRRC63Q05C16 580 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 UVSSAQ2YD98 709 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 PALB2Q86YC2 1186 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 POP1Q99575 1024 aaKnown RBP21.59■■□□□ 1.05
NPHP4-206ENST00000468253 TSG101Q99816 390 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 MKNK1Q9BUB5 465 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 MTMR12Q9C0I1 747 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 CLSTN2Q9H4D0 955 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 GDAP2Q9NXN4 497 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 SIX4Q9UIU6 781 aa21.59■■□□□ 1.05
NPHP4-206ENST00000468253 PPP1R3GB7ZBB8 358 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 CYB561D2O14569 222 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 PSMA7O14818 248 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 CETN3O15182 167 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 ABLIM3O94929 683 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 ODC1P11926 461 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 BMP6P22004 513 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 CCNE1P24864 410 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 POLR2BP30876 1174 aaKnown RBP21.58■■□□□ 1.05
NPHP4-206ENST00000468253 KCNQ1P51787 676 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 MYO1EQ12965 1108 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 SMAD2Q15796 467 aaKnown RBP21.58■■□□□ 1.05
NPHP4-206ENST00000468253 CAMK4Q16566 473 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 CEP135Q66GS9 1140 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 ANKRD40Q6AI12 368 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 ZNF280DQ6N043 979 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 CES5AQ6NT32 575 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 RSPO2Q6UXX9 243 aaPredicted RBP21.58■■□□□ 1.05
NPHP4-206ENST00000468253 INTS8Q75QN2 995 aaKnown RBP21.58■■□□□ 1.05
NPHP4-206ENST00000468253 ZC3H3Q8IXZ2 948 aaKnown RBP21.58■■□□□ 1.05
NPHP4-206ENST00000468253 ZNF461Q8TAF7 563 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 SUSD6Q92537 303 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 ZNF516Q92618 1163 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 PRKAG3Q9UGI9 489 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 FBXL5Q9UKA1 691 aa21.58■■□□□ 1.05
NPHP4-206ENST00000468253 PTPRJQ12913 1337 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 OR6C75A6NL08 312 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 TULP1O00294 542 aaPredicted RBP21.57■■□□□ 1.04
NPHP4-206ENST00000468253 ADAM12O43184 909 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 AKAP3O75969 853 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 FAM163BP0C2L3 166 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 CTXN3Q4LDR2 81 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 TPGS2Q68CL5 300 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 DPH6Q7L8W6 267 aa21.57■■□□□ 1.04
NPHP4-206ENST00000468253 KREMEN2Q8NCW0 462 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms