RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 DMAC2Q9NW81 257 aa13.06□□□□□ -0.32
CTNS-205ENST00000467663 FNIP2Q9P278 1114 aa13.06□□□□□ -0.32
CTNS-205ENST00000467663 IMPACTQ9P2X3 320 aa13.06□□□□□ -0.32
CTNS-205ENST00000467663 CACNG4Q9UBN1 327 aa13.06□□□□□ -0.32
CTNS-205ENST00000467663 NR2E1Q9Y466 385 aa13.06□□□□□ -0.32
CTNS-205ENST00000467663 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
CTNS-205ENST00000467663 CASTOR2A6NHX0 329 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 ABLIM1O14639 778 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 LDHAP00338 332 aaKnown RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 MCF2P10911 925 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 EPB41P11171 864 aaKnown RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 HOXD13P35453 343 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 PSMC2P35998 433 aaKnown RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 GRM5P41594 1212 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 ZNF568Q3ZCX4 644 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 ZC2HC1CQ53FD0 456 aaPredicted RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 TMC5Q6UXY8 1006 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 C15orf39Q6ZRI6 1047 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 GPR149Q86SP6 731 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 USP37Q86T82 979 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 IRF2BP1Q8IU81 584 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 CEP120Q8N960 986 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 CMASQ8NFW8 434 aaPredicted RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 HDAC7Q8WUI4 952 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 B3GALT6Q96L58 329 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 CNOT6LQ96LI5 555 aaKnown RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 PPP1R10Q96QC0 940 aaKnown RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 TUBGCP2Q9BSJ2 902 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 TARS2Q9BW92 718 aaKnown RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 AGPAT3Q9NRZ7 376 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 IFNKQ9P0W0 207 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 DPP7Q9UHL4 492 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 FRMD4BQ9Y2L6 1034 aa13.05□□□□□ -0.32
CTNS-205ENST00000467663 SF3B1O75533 1304 aaKnown RBP eCLIP13.05□□□□□ -0.324e-12■■■■■ 275.7
CTNS-205ENST00000467663 TDRD15B5MCY1 1934 aaKnown RBP13.05□□□□□ -0.32
CTNS-205ENST00000467663 C5orf42Q9H799 3197 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 C2CD4DB7Z1M9 353 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 TMEM189-UBE2V1I3L0A0 370 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 KIF4AO95239 1232 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 PAPLNO95428 1278 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 GLUD1P00367 558 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 MTIF2P46199 727 aaKnown RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 COPB1P53618 953 aaKnown RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 ZXDAP98168 799 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 POU5F1Q01860 360 aaKnown RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 CREMQ03060 361 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 NR1I3Q14994 352 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 KRT31Q15323 416 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 CCDC40Q4G0X9 1142 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 LILRA6Q6PI73 481 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 FEZF2Q8TBJ5 459 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 RHOBTB2Q9BYZ6 727 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 TOPORSQ9NS56 1045 aaPredicted RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 ARMCX3Q9UH62 379 aaPredicted RBP13.04□□□□□ -0.32
CTNS-205ENST00000467663 USTQ9Y2C2 406 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 HCN4Q9Y3Q4 1203 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 STYXL1Q9Y6J8 313 aa13.04□□□□□ -0.32
CTNS-205ENST00000467663 SMIM28A0A1B0GU29 152 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 A0A1W2PQC6 194 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 LGALS16A8MUM7 142 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 TOM1L1O75674 476 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 YARSP54577 528 aaKnown RBP13.03□□□□□ -0.32
CTNS-205ENST00000467663 GSDMDP57764 484 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 ELAVL2Q12926 359 aaKnown RBP13.03□□□□□ -0.32
CTNS-205ENST00000467663 TRIM14Q14142 442 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 KYAT1Q16773 422 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 PTPN21Q16825 1174 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 GLRA4Q5JXX5 417 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 FKBP15Q5T1M5 1219 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 ARMCX5Q6P1M9 558 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 ELMSAN1Q6PJG2 1045 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 DCLRE1AQ6PJP8 1040 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 CYP26C1Q6V0L0 522 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
CTNS-205ENST00000467663 APTXQ7Z2E3 356 aaKnown RBP13.03□□□□□ -0.32
CTNS-205ENST00000467663 BMP8AQ7Z5Y6 402 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 ZDHHC14Q8IZN3 488 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 HASPINQ8TF76 798 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 RIN2Q8WYP3 895 aaPredicted RBP13.03□□□□□ -0.32
CTNS-205ENST00000467663 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 UROC1Q96N76 676 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 ACAP3Q96P50 834 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 TTPALQ9BTX7 342 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 PLEKHA4Q9H4M7 779 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms