RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 HPS3Q969F9 1004 aa19.66■□□□□ 0.74
CGREF1-208ENST00000467539 NXPE3Q969Y0 559 aa19.66■□□□□ 0.74
CGREF1-208ENST00000467539 SENP8Q96LD8 212 aa19.66■□□□□ 0.74
CGREF1-208ENST00000467539 DPP3Q9NY33 737 aa19.66■□□□□ 0.74
CGREF1-208ENST00000467539 HCN4Q9Y3Q4 1203 aa19.66■□□□□ 0.74
CGREF1-208ENST00000467539 TIMM13Q9Y5L4 95 aaPredicted RBP19.66■□□□□ 0.74
CGREF1-208ENST00000467539 ZFP37Q9Y6Q3 630 aaPredicted RBP19.66■□□□□ 0.74
CGREF1-208ENST00000467539 C2orf16Q68DN1 1984 aa19.66■□□□□ 0.74
CGREF1-208ENST00000467539 PDCD11Q14690 1871 aaKnown RBP19.65■□□□□ 0.74
CGREF1-208ENST00000467539 SPTLC1O15269 473 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 EIF3DO15371 548 aaKnown RBP eCLIP19.65■□□□□ 0.74
CGREF1-208ENST00000467539 EXTL3O43909 919 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 SLFN14P0C7P3 912 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 FSHRP23945 695 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 HOXD13P35453 343 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 KRT85P78386 507 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 EHHADHQ08426 723 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 TDGQ13569 410 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 USP37Q86T82 979 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 GLIS3Q8NEA6 775 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 ZSWIM2Q8NEG5 633 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 SAAL1Q96ER3 474 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 SPATA32Q96LK8 384 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 CBWD1Q9BRT8 395 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 DNMT3BQ9UBC3 853 aaKnown RBP19.65■□□□□ 0.74
CGREF1-208ENST00000467539 AFF4Q9UHB7 1163 aaKnown RBP19.65■□□□□ 0.74
CGREF1-208ENST00000467539 POLIQ9UNA4 740 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 ATP6V1DQ9Y5K8 247 aa19.65■□□□□ 0.74
CGREF1-208ENST00000467539 SEC24AO95486 1093 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 FAM26FQ5R3K3 315 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 BRSK2Q8IWQ3 736 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 EFCAB13Q8IY85 973 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 CACTINQ8WUQ7 758 aaKnown RBP19.64■□□□□ 0.73
CGREF1-208ENST00000467539 PCIF1Q9H4Z3 704 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 CYP4F11Q9HBI6 524 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 SERTAD1Q9UHV2 236 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 DENND4AQ7Z401 1863 aa19.64■□□□□ 0.73
CGREF1-208ENST00000467539 OR6C75A6NL08 312 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 PRRG1O14668 218 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 CYP11A1P05108 521 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 PTPN2P17706 415 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 AFMP43652 599 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 SNRPFP62306 86 aaKnown RBP19.63■□□□□ 0.73
CGREF1-208ENST00000467539 NTHL1P78549 312 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 BECN1Q14457 450 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 OVOS1Q6IE37 1185 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 ARMCX5Q6P1M9 558 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 CEP57L1Q8IYX8 460 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 GPD1LQ8N335 351 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 FBXL6Q8N531 539 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 BORCS6Q96GS4 357 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 KCNH6Q9H252 994 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 BLZF1Q9H2G9 400 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 AVENQ9NQS1 362 aaPredicted RBP19.63■□□□□ 0.73
CGREF1-208ENST00000467539 RBAKQ9NYW8 714 aaPredicted RBP19.63■□□□□ 0.73
CGREF1-208ENST00000467539 USP25Q9UHP3 1055 aa19.63■□□□□ 0.73
CGREF1-208ENST00000467539 A0A1B0GVL5 298 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 GOLGA8IPA6NC78 632 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 GOLGA8JA6NMD2 632 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 ACTN4O43707 911 aaKnown RBP19.62■□□□□ 0.73
CGREF1-208ENST00000467539 LRG1P02750 347 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 ODC1P11926 461 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 CASP1P29466 404 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 TAF6P49848 677 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 WNT7BP56706 349 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 ADCY1Q08828 1119 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 GPR17Q13304 367 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 CUL4BQ13620 913 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 MYBPC2Q14324 1141 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 RNF19BQ6ZMZ0 732 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 SLC44A3Q8N4M1 653 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 PAGE5Q96GU1 130 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 CHAMP1Q96JM3 812 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 SCAND2PQ9GZW5 306 aaPredicted RBP19.62■□□□□ 0.73
CGREF1-208ENST00000467539 SMOC2Q9H3U7 446 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 KIAA1586Q9HCI6 787 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 HCFC1R1Q9NWW0 138 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 DSEQ9UL01 958 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 CDH7Q9ULB5 785 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 HPSEQ9Y251 543 aa19.62■□□□□ 0.73
CGREF1-208ENST00000467539 FAM237AA0A1B0GTK4 181 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 ZNF233A6NK53 670 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 ANHXE9PGG2 379 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 CYB561D2O14569 222 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 TGFB1I1O43294 461 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 TFAMQ00059 246 aaKnown RBP19.61■□□□□ 0.73
CGREF1-208ENST00000467539 PABPC1LQ4VXU2 614 aaKnown RBP19.61■□□□□ 0.73
CGREF1-208ENST00000467539 GET4Q7L5D6 327 aaPredicted RBP19.61■□□□□ 0.73
CGREF1-208ENST00000467539 ITFG1Q8TB96 612 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 SCFD1Q8WVM8 642 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 RSAD2Q8WXG1 361 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 FGF13Q92913 245 aa19.61■□□□□ 0.73
CGREF1-208ENST00000467539 KPNA7A9QM74 516 aa19.6■□□□□ 0.73
CGREF1-208ENST00000467539 CPB1P15086 417 aa19.6■□□□□ 0.73
CGREF1-208ENST00000467539 PFKFB1P16118 471 aa19.6■□□□□ 0.73
CGREF1-208ENST00000467539 SURF1Q15526 300 aa19.6■□□□□ 0.73
CGREF1-208ENST00000467539 SUGP1Q8IWZ8 645 aaKnown RBP19.6■□□□□ 0.73
CGREF1-208ENST00000467539 PDE11AQ9HCR9 933 aa19.6■□□□□ 0.73
CGREF1-208ENST00000467539 SLC39A2Q9NP94 309 aa19.6■□□□□ 0.73
CGREF1-208ENST00000467539 HSPBP1Q9NZL4 362 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms