RNA–Protein interactions for RNA: ENST00000467515.1

EPHB4-203, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-203ENST00000467515 WDR44Q5JSH3 913 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 SPOUT1Q5T280 376 aaKnown RBP17.63■□□□□ 0.41
EPHB4-203ENST00000467515 SLC39A11Q8N1S5 342 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 CCDC150Q8NCX0 1101 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 FAXDC2Q96IV6 333 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 IMPG2Q9BZV3 1241 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 TRIM5Q9C035 493 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 APOBEC3GQ9HC16 384 aaKnown RBP17.63■□□□□ 0.41
EPHB4-203ENST00000467515 PLCB1Q9NQ66 1216 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 GDAP2Q9NXN4 497 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 ADAM28Q9UKQ2 775 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 PRG3Q9Y2Y8 225 aaPredicted RBP17.63■□□□□ 0.41
EPHB4-203ENST00000467515 RWDD3Q9Y3V2 267 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 NUB1Q9Y5A7 615 aa17.63■□□□□ 0.41
EPHB4-203ENST00000467515 KPNA7A9QM74 516 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 NT5C1B-RDH14C9J2C7 533 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 ARHGEF15O94989 841 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 PBX2P40425 430 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 PBX3P40426 434 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 WDR72Q3MJ13 1102 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 TIGD5Q53EQ6 642 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 ZNF667Q5HYK9 610 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 SPOPLQ6IQ16 392 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 LIMS2Q7Z4I7 341 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 TMEM173Q86WV6 379 aaPredicted RBP17.62■□□□□ 0.41
EPHB4-203ENST00000467515 BCL7CQ8WUZ0 217 aaPredicted RBP17.62■□□□□ 0.41
EPHB4-203ENST00000467515 TATDN2Q93075 761 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 ELMO3Q96BJ8 720 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 IGSF21Q96ID5 467 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 NT5C1BQ96P26 610 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 PCDHB12Q9Y5F1 795 aa17.62■□□□□ 0.41
EPHB4-203ENST00000467515 M0QZQ0 153 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 TADA2AO75478 443 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 CA3P07451 260 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 BMPR1AP36894 532 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 BRCC3P46736 316 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 KLK7P49862 253 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 ZNF75DP51815 510 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 SMAD3P84022 425 aaKnown RBP17.61■□□□□ 0.41
EPHB4-203ENST00000467515 PTPN21Q16825 1174 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 KLHDC7AQ5VTJ3 777 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 PHLDB3Q6NSJ2 640 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 RNF168Q8IYW5 571 aaPredicted RBP17.61■□□□□ 0.41
EPHB4-203ENST00000467515 MRFAP1L1Q96HT8 127 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 SUSD3Q96L08 255 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 LSM14BQ9BX40 385 aaKnown RBP17.61■□□□□ 0.41
EPHB4-203ENST00000467515 PLVAPQ9BX97 442 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 SPG21Q9NZD8 308 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 APEX2Q9UBZ4 518 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 MSRAQ9UJ68 235 aa17.61■□□□□ 0.41
EPHB4-203ENST00000467515 C5orf67F2Z3F1 127 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 NOL4O94818 638 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 PPM1AP35813 382 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 ASPAP45381 313 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 MRE11P49959 708 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 APBA1Q02410 837 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 GCNT1Q02742 428 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 TAP1Q03518 808 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 LRMPQ12912 555 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 FUT10Q6P4F1 479 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 VSTM4Q8IW00 320 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 ARHGEF19Q8IW93 802 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 TOP6BLQ8N6T0 577 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 HASPINQ8TF76 798 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 SENP8Q96LD8 212 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 SAMD11Q96NU1 681 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 BCO2Q9BYV7 579 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 NIF3L1Q9GZT8 377 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.6■□□□□ 0.41
EPHB4-203ENST00000467515 FBXL5Q9UKA1 691 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 POLIQ9UNA4 740 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 DAAM1Q9Y4D1 1078 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 SNX9Q9Y5X1 595 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 ITIH6Q6UXX5 1313 aa17.6■□□□□ 0.41
EPHB4-203ENST00000467515 SF3B1O75533 1304 aaKnown RBP eCLIP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 TRAPPC3O43617 180 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 FAM163BP0C2L3 166 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 P4HA1P13674 534 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 RFX1P22670 979 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 ERVK-21P61565 698 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 PLCB3Q01970 1234 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 LRIT3Q3SXY7 679 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 PRPF38BQ5VTL8 546 aaKnown RBP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 DPH6Q7L8W6 267 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 TMEM169Q96HH4 297 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 FAM81BQ96LP2 452 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 TGS1Q96RS0 853 aaKnown RBP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 C17orf80Q9BSJ5 609 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 VN1R3Q9BXE9 311 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 GPR62Q9BZJ7 368 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 GANQ9H2C0 597 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 NKX2-4Q9H2Z4 354 aa17.59■□□□□ 0.41
EPHB4-203ENST00000467515 FAM124BQ9H5Z6 455 aaPredicted RBP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 NXF1Q9UBU9 619 aaKnown RBP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 COLQQ9Y215 455 aaPredicted RBP17.59■□□□□ 0.41
EPHB4-203ENST00000467515 I3L4J1 428 aa17.58■□□□□ 0.4
EPHB4-203ENST00000467515 CYB561D2O14569 222 aa17.58■□□□□ 0.4
EPHB4-203ENST00000467515 SYN3O14994 580 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms