RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 SEM1Q6ZVN7 128 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 UBE3BQ7Z3V4 1068 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 MIER2Q8N344 545 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 CAGE1Q8TC20 777 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 CASKIN2Q8WXE0 1202 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 HDAC10Q969S8 669 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 CYFIP2Q96F07 1278 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 TMX3Q96JJ7 454 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 DUSP26Q9BV47 211 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 REXO4Q9GZR2 422 aaKnown RBP4.62□□□□□ -1.67
CCDC58-203ENST00000466854 GALNT9Q9HCQ5 603 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 AASDHPPTQ9NRN7 309 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 FRMD4BQ9Y2L6 1034 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 SPEF1Q9Y4P9 236 aa4.62□□□□□ -1.67
CCDC58-203ENST00000466854 TEX33O43247 280 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 GPANK1O95872 356 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 IL10RAQ13651 578 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 ATP2B3Q16720 1220 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 NOL8Q76FK4 1167 aaKnown RBP4.61□□□□□ -1.67
CCDC58-203ENST00000466854 FAM43AQ8N2R8 423 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 NELL1Q92832 810 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 KAT5Q92993 513 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 PDLIM2Q96JY6 352 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 SPATA5L1Q9BVQ7 753 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 UNKLQ9H9P5 680 aaKnown RBP4.61□□□□□ -1.67
CCDC58-203ENST00000466854 CASS4Q9NQ75 786 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 SEMA4GQ9NTN9 838 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 TBCCD1Q9NVR7 557 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 HSFX1Q9UBD0 423 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 LIMCH1Q9UPQ0 1083 aa4.61□□□□□ -1.67
CCDC58-203ENST00000466854 LUC7L2Q9Y383 392 aaKnown RBP4.61□□□□□ -1.67
CCDC58-203ENST00000466854 TCRBV7S2A1N4TA0A589 114 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 FZD9O00144 591 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 HTRA2O43464 458 aaPredicted RBP4.6□□□□□ -1.67
CCDC58-203ENST00000466854 RBMXL2O75526 392 aaKnown RBP4.6□□□□□ -1.67
CCDC58-203ENST00000466854 IL33O95760 270 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 C1RP00736 705 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 AMY1AP04745 511 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 CT47B1P0C2W7 299 aaPredicted RBP4.6□□□□□ -1.67
CCDC58-203ENST00000466854 RECQLP46063 649 aaPredicted RBP4.6□□□□□ -1.67
CCDC58-203ENST00000466854 VAV2P52735 878 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 KRTAP10-11P60412 298 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 EXOSC10Q01780 885 aaKnown RBP4.6□□□□□ -1.67
CCDC58-203ENST00000466854 NHLH1Q02575 133 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 MTM1Q13496 603 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 PPP4R3AQ6IN85 833 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 GADL1Q6ZQY3 521 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 ZGPATQ8N5A5 531 aaKnown RBP4.6□□□□□ -1.67
CCDC58-203ENST00000466854 COA7Q96BR5 231 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 AIFM2Q9BRQ8 373 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 KIAA1586Q9HCI6 787 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 NESP48681 1621 aa4.6□□□□□ -1.67
CCDC58-203ENST00000466854 A0A0U1RQG5 324 aaPredicted RBP4.59□□□□□ -1.67
CCDC58-203ENST00000466854 LRRC3CA6NJW4 275 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 ARHGEF11O15085 1522 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 RPLP2P05387 115 aaKnown RBP4.59□□□□□ -1.67
CCDC58-203ENST00000466854 CKBP12277 381 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 CACNA2D1P54289 1103 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 NOMO3P69849 1222 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 MRPS35P82673 323 aaKnown RBP4.59□□□□□ -1.67
CCDC58-203ENST00000466854 ATP8B2P98198 1209 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 SLFN5Q08AF3 891 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 GEN1Q17RS7 908 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 C3orf36Q3SXR2 165 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 NOMO2Q5JPE7 1267 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 GLCCI1Q86VQ1 547 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 ARHGEF25Q86VW2 580 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 LNX2Q8N448 690 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 Q8NA96 180 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 ACTRT2Q8TDY3 377 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 CHMP4CQ96CF2 233 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 MARS2Q96GW9 593 aaKnown RBP4.59□□□□□ -1.67
CCDC58-203ENST00000466854 CLPTM1LQ96KA5 538 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 SLC13A1Q9BZW2 595 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 GSTO2Q9H4Y5 243 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 KCTD5Q9NXV2 234 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 DDX56Q9NY93 547 aaKnown RBP4.59□□□□□ -1.67
CCDC58-203ENST00000466854 IP6K2Q9UHH9 426 aa4.59□□□□□ -1.67
CCDC58-203ENST00000466854 MYADML2A6NDP7 307 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 TPD52L2O43399 206 aaKnown RBP4.58□□□□□ -1.68
CCDC58-203ENST00000466854 ALAS1P13196 640 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 WASP42768 502 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 NEK2P51955 445 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 ADKP55263 362 aaKnown RBP4.58□□□□□ -1.68
CCDC58-203ENST00000466854 CDC42EP1Q00587 391 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 FOXF2Q12947 444 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 SP5Q6BEB4 398 aaPredicted RBP4.58□□□□□ -1.68
CCDC58-203ENST00000466854 TBC1D15Q8TC07 691 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 SSH3Q8TE77 659 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 PTCD3Q96EY7 689 aaKnown RBP4.58□□□□□ -1.68
CCDC58-203ENST00000466854 C11orf54Q9H0W9 315 aaPredicted RBP4.58□□□□□ -1.68
CCDC58-203ENST00000466854 KLK15Q9H2R5 256 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 LRIT1Q9P2V4 623 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 SERPINB13Q9UIV8 391 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 MTO1Q9Y2Z2 717 aaKnown RBP4.58□□□□□ -1.68
CCDC58-203ENST00000466854 IPPQ9Y573 584 aa4.58□□□□□ -1.68
CCDC58-203ENST00000466854 CDHR4A6H8M9 788 aa4.57□□□□□ -1.68
CCDC58-203ENST00000466854 ERN1O75460 977 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms