RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 SLC16A1P53985 500 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 PIGFQ07326 219 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 TARDBPQ13148 414 aaKnown RBP eCLIP5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 DYRK1AQ13627 763 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 PTPRRQ15256 657 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 PREPLQ4J6C6 727 aaPredicted RBP5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 SH2D3CQ8N5H7 860 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 TOR1AIP2Q8NFQ8 470 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 SLC30A5Q8TAD4 765 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 TFAP2BQ92481 460 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 HDAC10Q969S8 669 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 PACSIN1Q9BY11 444 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 CTTNBP2NLQ9P2B4 639 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 PRKAB1Q9Y478 270 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 PHLDB1Q86UU1 1377 aa5.28□□□□□ -1.56
CHMP2B-202ENST00000466696 CCDC195A0A1B0GUA6 201 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 SGTAO43765 313 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 SLC43A1O75387 559 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 SBK3P0C264 359 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 PROK1P58294 105 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 SRSF4Q08170 494 aaKnown RBP5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 CD300EQ496F6 205 aaPredicted RBP5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 EPHA10Q5JZY3 1008 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 TSTD2Q5T7W7 516 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 KIAA1614Q5VZ46 1190 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 AOPEPQ8N6M6 819 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 IFI44Q8TCB0 444 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 LPIN2Q92539 896 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 SMG7Q92540 1137 aaKnown RBP5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 SNX19Q92543 992 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 KLHL32Q96NJ5 620 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 PUS7LQ9H0K6 701 aaKnown RBP5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 USP35Q9P2H5 1018 aa5.27□□□□□ -1.57
CHMP2B-202ENST00000466696 NDUFS2O75306 463 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 HLXQ14774 488 aaPredicted RBP5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 RAB39AQ14964 217 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 PGM2L1Q6PCE3 622 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 MICALCLQ6ZW33 695 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 ZNF365Q70YC5 407 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 ADGRG5Q8IZF4 528 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 RAB24Q969Q5 203 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 VSX1Q9NZR4 365 aaPredicted RBP5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 MCM8Q9UJA3 840 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 PCDHA13Q9Y5I0 950 aa5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 COL3A1P02461 1466 aaPredicted RBP5.26□□□□□ -1.57
CHMP2B-202ENST00000466696 CGB1A6NKQ9 187 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 E7ENX8 843 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 TOR1BO14657 336 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 SUN1O94901 812 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 ANXA1P04083 346 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 CD1AP06126 327 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 NXPH1P58417 271 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 POU6F2P78424 691 aaPredicted RBP5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 TAP2Q03519 686 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 ITIH3Q06033 890 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 PPP4R3AQ6IN85 833 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 GADL1Q6ZQY3 521 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 TSHZ1Q6ZSZ6 1077 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 CFAP52Q8N1V2 620 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 CNTD1Q8N815 330 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 MYCBPAPQ8TBZ2 947 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 HASPINQ8TF76 798 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 JADE3Q92613 823 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 SLC29A3Q9BZD2 475 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 IMPG2Q9BZV3 1241 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 MKS1Q9NXB0 559 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 SLC5A4Q9NY91 659 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 CALCOCO1Q9P1Z2 691 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 TUBD1Q9UJT1 453 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 WNT6Q9Y6F9 365 aa5.25□□□□□ -1.57
CHMP2B-202ENST00000466696 ADM5C9JUS6 153 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 ERBB2P04626 1255 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 RPLP2P05387 115 aaKnown RBP5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 CHRM2P08172 466 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 POU3F3P20264 500 aaPredicted RBP5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 ZNF280AP59817 542 aaPredicted RBP5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 ACAP2Q15057 778 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 TXNRD1Q16881 649 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 NECAB2Q7Z6G3 386 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 B3GALNT2Q8NCR0 500 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 SLC17A8Q8NDX2 589 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 MRGPRX4Q96LA9 322 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 RNF7Q9UBF6 113 aa5.24□□□□□ -1.57
CHMP2B-202ENST00000466696 GCOM1H8Y6P7 765 aaPredicted RBP5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 ELFN1P0C7U0 828 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 PPP3CBP16298 524 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 C5AR1P21730 350 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 INAVAQ3KP66 663 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 FAM153CQ494X1 144 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 FLYWCH1Q4VC44 716 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 TMPRSS9Q7Z410 1059 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 PDPRQ8NCN5 879 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 NSUN7Q8NE18 718 aaKnown RBP5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 C1orf162Q8NEQ5 155 aaPredicted RBP5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 TMIEQ8NEW7 156 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 SCARB1Q8WTV0 552 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 CLPTM1LQ96KA5 538 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 HAPLN3Q96S86 360 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms