RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 NUP210Q8TEM1 1887 aaPredicted RBP20.83■□□□□ 0.92
COL9A3-206ENST00000466532 VPS37CA5D8V6 355 aaPredicted RBP20.82■□□□□ 0.92
COL9A3-206ENST00000466532 OAZ2O95190 189 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 CCR2P41597 374 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 DSTYKQ6XUX3 929 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 USP37Q86T82 979 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 HS6ST3Q8IZP7 471 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 ELSPBP1Q96BH3 223 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 FAM212AQ96EL1 285 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 BCO2Q9BYV7 579 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 CEP72Q9P209 647 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 MTF2Q9Y483 593 aaPredicted RBP20.82■□□□□ 0.92
COL9A3-206ENST00000466532 R4GN57 208 aa20.82■□□□□ 0.92
COL9A3-206ENST00000466532 SPTBN4Q9H254 2564 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 A0A0B4J269 797 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 MICAL2O94851 1124 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 ADRB2P07550 413 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 OR4Q2P0C623 313 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 CD72P21854 359 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 NMT1P30419 496 aaKnown RBP20.81■□□□□ 0.92
COL9A3-206ENST00000466532 AARSP49588 968 aaKnown RBP eCLIP20.81■□□□□ 0.92
COL9A3-206ENST00000466532 SLC39A4Q6P5W5 647 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 TPRG1Q6ZUI0 275 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 KCNG4Q8TDN1 519 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 TSPAN18Q96SJ8 248 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 OXCT2Q9BYC2 517 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-206ENST00000466532 SEMA4AQ9H3S1 761 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 LTB4R2Q9NPC1 389 aa20.81■□□□□ 0.92
COL9A3-206ENST00000466532 CPSF3Q9UKF6 684 aaKnown RBP20.81■□□□□ 0.92
COL9A3-206ENST00000466532 DENND4CQ5VZ89 1909 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 FAM170BA6NMN3 283 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 NRG2O14511 850 aaPredicted RBP20.8■□□□□ 0.92
COL9A3-206ENST00000466532 PPEF2O14830 753 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 SP9P0CG40 484 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 MYL4P12829 197 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 FCARP24071 287 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 ABCD1P33897 745 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 GTF2BQ00403 316 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 FAM78AQ5JUQ0 283 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 SPATA1Q5VX52 437 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 JADE1Q6IE81 842 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 MAP4K3Q8IVH8 894 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 CD302Q8IX05 232 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 BEST2Q8NFU1 509 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 PGLYRP2Q96PD5 576 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 FIZ1Q96SL8 496 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 OSBPL6Q9BZF3 934 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 CCSER1Q9C0I3 900 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 ZFP14Q9HCL3 533 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 ASAH2Q9NR71 780 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 YIPF1Q9Y548 306 aa20.8■□□□□ 0.92
COL9A3-206ENST00000466532 ZNF638Q14966 1978 aaKnown RBP20.79■□□□□ 0.92
COL9A3-206ENST00000466532 OR6C75A6NL08 312 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 LMNAP02545 664 aaKnown RBP20.79■□□□□ 0.92
COL9A3-206ENST00000466532 DDIT3P35638 169 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 CUL4AQ13619 759 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 GRM2Q14416 872 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 ZC2HC1CQ53FD0 456 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-206ENST00000466532 ZC3H14Q6PJT7 736 aaKnown RBP20.79■□□□□ 0.92
COL9A3-206ENST00000466532 LEMD2Q8NC56 503 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 EPSTI1Q96J88 318 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 ASB16Q96NS5 453 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 HEBP1Q9NRV9 189 aa20.79■□□□□ 0.92
COL9A3-206ENST00000466532 SPATA6Q9NWH7 488 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-206ENST00000466532 KIF26AQ9ULI4 1882 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-206ENST00000466532 WDR87Q6ZQQ6 2873 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 ANKRD63C9JTQ0 380 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 MOSPD3O75425 235 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 VNN2O95498 520 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 NFICP08651 508 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 GJA1P17302 382 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 TYMPP19971 482 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 ACOT2P49753 483 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 EPHA5P54756 1037 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 LILRA4P59901 499 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 GPR17Q13304 367 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 PLD1Q13393 1074 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 OVOS1Q6IE37 1185 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 USP49Q70CQ1 688 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 KRI1Q8N9T8 703 aaKnown RBP20.78■□□□□ 0.92
COL9A3-206ENST00000466532 DNASE1L2Q92874 299 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 ZSWIM3Q96MP5 696 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 BRD9Q9H8M2 597 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
COL9A3-206ENST00000466532 TISP43B9A030 160 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 ODC1P11926 461 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 PDCP20941 246 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 TARSP26639 723 aaKnown RBP20.77■□□□□ 0.92
COL9A3-206ENST00000466532 MAGEA9P43362 315 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 DUSP4Q13115 394 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 TMEM132DQ14C87 1099 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 PTPAQ15257 358 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 C9orf57Q5W0N0 161 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 ADALQ6DHV7 355 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 ZNF852Q6ZMS4 543 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 DYMQ7RTS9 669 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 MAML2Q8IZL2 1156 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-206ENST00000466532 SMARCD2Q92925 531 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 SENP8Q96LD8 212 aa20.77■□□□□ 0.92
COL9A3-206ENST00000466532 NELL2Q99435 816 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms