RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PHLDB3Q6NSJ2 640 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 DCLRE1AQ6PJP8 1040 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 VSTM4Q8IW00 320 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 ARHGEF19Q8IW93 802 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 COLGALT1Q8NBJ5 622 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 TATDN2Q93075 761 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 FAM193BQ96PV7 902 aaPredicted RBP11.98□□□□□ -0.49
VCP-204ENST00000466100 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 LSM14BQ9BX40 385 aaKnown RBP11.98□□□□□ -0.49
VCP-204ENST00000466100 TRIM5Q9C035 493 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 TTYH3Q9C0H2 523 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 GDAP2Q9NXN4 497 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 YBX2Q9Y2T7 364 aaKnown RBP11.98□□□□□ -0.49
VCP-204ENST00000466100 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
VCP-204ENST00000466100 PCDHA11Q9Y5I1 949 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 MYO9BQ13459 2157 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 PTPRDP23468 1912 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 LINC01553A4QN01 128 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 B3GAT3O94766 335 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 TPM3P06753 285 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 PAX3P23760 479 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 ASPAP45381 313 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 SV2CQ496J9 727 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 KLHDC7AQ5VTJ3 777 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 KCNT2Q6UVM3 1135 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 RNF168Q8IYW5 571 aaPredicted RBP11.97□□□□□ -0.49
VCP-204ENST00000466100 SLC39A11Q8N1S5 342 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 FIBCD1Q8N539 461 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 UBR7Q8N806 425 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 HASPINQ8TF76 798 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 KAT5Q92993 513 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 FAXDC2Q96IV6 333 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 SUSD3Q96L08 255 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 KREMEN1Q96MU8 473 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 ZNF558Q96NG5 402 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 NT5C1BQ96P26 610 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 VN1R3Q9BXE9 311 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 NAA15Q9BXJ9 866 aaKnown RBP11.97□□□□□ -0.49
VCP-204ENST00000466100 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 BCO2Q9BYV7 579 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 NIF3L1Q9GZT8 377 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 SDCBP2Q9H190 292 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.97□□□□□ -0.49
VCP-204ENST00000466100 APEX2Q9UBZ4 518 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 FBXL5Q9UKA1 691 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 POLIQ9UNA4 740 aa11.97□□□□□ -0.49
VCP-204ENST00000466100 MYO7AQ13402 2215 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.96□□□□□ -0.49
VCP-204ENST00000466100 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.96□□□□□ -0.49
VCP-204ENST00000466100 CARNS1A5YM72 827 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 KPNA7A9QM74 516 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 NT5C1B-RDH14C9J2C7 533 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 M0QZQ0 153 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 ADCY5O95622 1261 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 ALDH2P05091 517 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 CA3P07451 260 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 UCHL3P15374 230 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 CDC25BP30305 580 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 PBX2P40425 430 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 BRCC3P46736 316 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 GCNT1Q02742 428 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 MYO1EQ12965 1108 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 WDR72Q3MJ13 1102 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 TIGD5Q53EQ6 642 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 FIGNQ5HY92 759 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 ZNF667Q5HYK9 610 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 WDR44Q5JSH3 913 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 IQCEQ6IPM2 695 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 SPRED2Q7Z698 418 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 IGSF21Q96ID5 467 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 SENP8Q96LD8 212 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 ARID3AQ99856 593 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 IMPG2Q9BZV3 1241 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 FAM207AQ9NSI2 230 aaPredicted RBP11.96□□□□□ -0.49
VCP-204ENST00000466100 ADAM28Q9UKQ2 775 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 FAN1Q9Y2M0 1017 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.49
VCP-204ENST00000466100 I3L4J1 428 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 GYPCP04921 128 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 CYP11A1P05108 521 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 ACO1P21399 889 aaKnown RBP11.95□□□□□ -0.5
VCP-204ENST00000466100 RFX1P22670 979 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 ALDH7A1P49419 539 aaKnown RBP11.95□□□□□ -0.5
VCP-204ENST00000466100 JAM2P57087 298 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 LRMPQ12912 555 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 TBX2Q13207 712 aaPredicted RBP11.95□□□□□ -0.5
VCP-204ENST00000466100 CUL2Q13617 745 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 SOWAHAQ2M3V2 549 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 SPECC1LQ69YQ0 1117 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 FUT10Q6P4F1 479 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 SCARA5Q6ZMJ2 495 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 TOP6BLQ8N6T0 577 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 NEK11Q8NG66 645 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 KBTBD7Q8WVZ9 684 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 BAP1Q92560 729 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 COLEC11Q9BWP8 271 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 GPR62Q9BZJ7 368 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms