RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 MFAP3LO75121 409 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 ZC3H11AO75152 810 aaKnown RBP eCLIP18.48■□□□□ 0.55
PTPRU-206ENST00000465525 GJB5O95377 273 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 LRPAP1P30533 357 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 KRT9P35527 623 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 RAP1GAPP47736 663 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 TUSC3Q13454 348 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 TC2NQ8N9U0 490 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 C3orf58Q8NDZ4 430 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 HASPINQ8TF76 798 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 PDE4DIPQ5VU43 2346 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 A0A1W2PQJ5 194 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 DRAP1Q14919 205 aaPredicted RBP18.47■□□□□ 0.55
PTPRU-206ENST00000465525 ZNF667Q5HYK9 610 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 E4F1Q66K89 784 aaPredicted RBP18.47■□□□□ 0.55
PTPRU-206ENST00000465525 HERC6Q8IVU3 1022 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 ZNF689Q96CS4 500 aaPredicted RBP18.47■□□□□ 0.55
PTPRU-206ENST00000465525 SPAG5Q96R06 1193 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 ZBED2Q9BTP6 218 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 NIF3L1Q9GZT8 377 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 SMYD3Q9H7B4 428 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 WEE2P0C1S8 567 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 ATICP31939 592 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 ASPAP45381 313 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 ZBED6P86452 979 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 MYO1EQ12965 1108 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 CUL2Q13617 745 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 PDXDC1Q6P996 788 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 COLGALT2Q8IYK4 626 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 LRRC52Q8N7C0 313 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 FAM193BQ96PV7 902 aaPredicted RBP18.47■□□□□ 0.55
PTPRU-206ENST00000465525 MRPL9Q9BYD2 267 aaKnown RBP18.47■□□□□ 0.55
PTPRU-206ENST00000465525 GPR88Q9GZN0 384 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 NRDE2Q9H7Z3 1164 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 INSL6Q9Y581 213 aa18.47■□□□□ 0.55
PTPRU-206ENST00000465525 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.47■□□□□ 0.55
PTPRU-206ENST00000465525 KIAA1671Q9BY89 1806 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 CD58P19256 250 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 PBX3P40426 434 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 USP8P40818 1118 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 OR1G1P47890 313 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 TAF6P49848 677 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 MFAP3P55082 362 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 CDH8P55286 799 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 JAM2P57087 298 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 HTRA4P83105 476 aaPredicted RBP18.46■□□□□ 0.55
PTPRU-206ENST00000465525 ARID5AQ03989 594 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 DSC1Q08554 894 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 UPP1Q16831 310 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 ZNF397Q8NF99 534 aaPredicted RBP18.46■□□□□ 0.55
PTPRU-206ENST00000465525 TAF4BQ92750 862 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 ZNF560Q96MR9 790 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 ZNF830Q96NB3 372 aaPredicted RBP18.46■□□□□ 0.55
PTPRU-206ENST00000465525 MMS19Q96T76 1030 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 YME1L1Q96TA2 773 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 RAD9AQ99638 391 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 SDCBP2Q9H190 292 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 PRG3Q9Y2Y8 225 aaPredicted RBP18.46■□□□□ 0.55
PTPRU-206ENST00000465525 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
PTPRU-206ENST00000465525 F8VZ95 297 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 I3L4J1 428 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 FOXN3O00409 490 aaPredicted RBP18.45■□□□□ 0.54
PTPRU-206ENST00000465525 ITGB1P05556 798 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 LILRA4P59901 499 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 TNNC1P63316 161 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 CNGA4Q8IV77 575 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 IQCDQ96DY2 449 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 STK33Q9BYT3 514 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 RC3H2Q9HBD1 1191 aaKnown RBP18.45■□□□□ 0.54
PTPRU-206ENST00000465525 ABHD10Q9NUJ1 306 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 FBXL5Q9UKA1 691 aa18.45■□□□□ 0.54
PTPRU-206ENST00000465525 KPNA7A9QM74 516 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 B3GAT3O94766 335 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 GFPT2O94808 682 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 KIF4AO95239 1232 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 CALCAP01258 141 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 RPL9P32969 192 aaKnown RBP18.44■□□□□ 0.54
PTPRU-206ENST00000465525 GSDMDP57764 484 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 GCNT1Q02742 428 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 SV2CQ496J9 727 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 CMTR2Q8IYT2 770 aaKnown RBP18.44■□□□□ 0.54
PTPRU-206ENST00000465525 TDHQ8IZJ6 230 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 LRRC43Q8N309 656 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 EDEM3Q9BZQ6 932 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 VRTNQ9H8Y1 702 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 NT5C1B-RDH14C9J2C7 533 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 TLL1O43897 1013 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 STAU1O95793 577 aaKnown RBP18.44■□□□□ 0.54
PTPRU-206ENST00000465525 KRT5P13647 590 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 RFX1P22670 979 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 PNPLA4P41247 253 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 BRCC3P46736 316 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 SLC11A1P49279 550 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 BTG3Q14201 252 aaPredicted RBP18.44■□□□□ 0.54
PTPRU-206ENST00000465525 SFMBT2Q5VUG0 894 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 CD300LGQ6UXG3 332 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 OR8K1Q8NGG5 319 aa18.44■□□□□ 0.54
PTPRU-206ENST00000465525 DDX27Q96GQ7 796 aaKnown RBP18.44■□□□□ 0.54
PTPRU-206ENST00000465525 UROC1Q96N76 676 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms