RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 DDCP20711 480 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 EDNRBP24530 442 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 ODF1Q14990 250 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 BRDTQ58F21 947 aaPredicted RBP5.31□□□□□ -1.56
VPS8-217ENST00000465213 PPP4R4Q6NUP7 873 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 ZNF529Q6P280 563 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 RINLQ6ZS11 566 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 SEM1Q6ZVN7 128 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 MED25Q71SY5 747 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 DRC7Q8IY82 874 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 PAF1Q8N7H5 531 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 FAM98AQ8NCA5 519 aaKnown RBP5.31□□□□□ -1.56
VPS8-217ENST00000465213 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 PHACTR3Q96KR7 559 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 ARPC5LQ9BPX5 153 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 ASPSCR1Q9BZE9 553 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 MANSC1Q9H8J5 431 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 ALG13Q9NP73 1137 aaKnown RBP5.31□□□□□ -1.56
VPS8-217ENST00000465213 FBXO34Q9NWN3 711 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 LIMCH1Q9UPQ0 1083 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 IPPQ9Y573 584 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 INSL6Q9Y581 213 aa5.31□□□□□ -1.56
VPS8-217ENST00000465213 MYBBP1AQ9BQG0 1328 aaKnown RBP5.3□□□□□ -1.56
VPS8-217ENST00000465213 MARCH11A6NNE9 402 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 TEX33O43247 280 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 HTRA2O43464 458 aaPredicted RBP5.3□□□□□ -1.56
VPS8-217ENST00000465213 EPB41L2O43491 1005 aaKnown RBP5.3□□□□□ -1.56
VPS8-217ENST00000465213 ALDH1L1O75891 902 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 NDUFA10O95299 355 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 POMCP01189 267 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 FOXI1Q12951 378 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 TMEM95Q3KNT9 176 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 SYCP2LQ5T4T6 812 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 L1TD1Q5T7N2 865 aaKnown RBP5.3□□□□□ -1.56
VPS8-217ENST00000465213 ICE2Q659A1 982 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 FBXO42Q6P3S6 717 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 GLCCI1Q86VQ1 547 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 RHOT2Q8IXI1 618 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 OR56A1Q8NGH5 318 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 NELL1Q92832 810 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 ZHX3Q9H4I2 956 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 KLHL11Q9NVR0 708 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 SAP30BPQ9UHR5 308 aaKnown RBP5.3□□□□□ -1.56
VPS8-217ENST00000465213 RUVBL1Q9Y265 456 aaKnown RBP5.3□□□□□ -1.56
VPS8-217ENST00000465213 PCDHA13Q9Y5I0 950 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 MRFAP1Q9Y605 127 aa5.3□□□□□ -1.56
VPS8-217ENST00000465213 COL11A2P13942 1736 aaPredicted RBP5.29□□□□□ -1.56
VPS8-217ENST00000465213 ARHGEF17Q96PE2 2063 aaPredicted RBP5.29□□□□□ -1.56
VPS8-217ENST00000465213 NPHP1O15259 732 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 TIMM44O43615 452 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 PRSS23O95084 383 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 CDK4P11802 303 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 SLC6A2P23975 617 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 GUCY1B3Q02153 619 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 TARDBPQ13148 414 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS8-217ENST00000465213 PTPN21Q16825 1174 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 ERCC6LQ2NKX8 1250 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 C3orf36Q3SXR2 165 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 ABHD17BQ5VST6 288 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 TSHZ3Q63HK5 1081 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 UBE3BQ7Z3V4 1068 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 CMTR2Q8IYT2 770 aaKnown RBP5.29□□□□□ -1.56
VPS8-217ENST00000465213 PDILTQ8N807 584 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 HDAC10Q969S8 669 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 COA7Q96BR5 231 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 SLC13A1Q9BZW2 595 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 SERPINB13Q9UIV8 391 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 MAP3K2Q9Y2U5 619 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 FPGT-TNNI3KV9GXZ4 949 aa5.29□□□□□ -1.56
VPS8-217ENST00000465213 SPATA31A6Q5VVP1 1343 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 CCDC154A6NI56 674 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 TBX3O15119 743 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 ELANEP08246 267 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 SPATA31D3P0C874 917 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 CASP2P42575 452 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 SLC16A1P53985 500 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 CTXN1P60606 82 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 KIF23Q02241 960 aaPredicted RBP5.28□□□□□ -1.56
VPS8-217ENST00000465213 IL10RAQ13651 578 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 MORC3Q14149 939 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 TTF1Q15361 905 aaPredicted RBP5.28□□□□□ -1.56
VPS8-217ENST00000465213 SPATA31D4Q6ZUB0 917 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 PNMA8AQ86V59 439 aaPredicted RBP5.28□□□□□ -1.56
VPS8-217ENST00000465213 DCBLD1Q8N8Z6 715 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 TEX19Q8NA77 164 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 SIMC1Q8NDZ2 872 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 CPEB3Q8NE35 698 aaKnown RBP5.28□□□□□ -1.56
VPS8-217ENST00000465213 SLC9A6Q92581 669 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 SMAD5Q99717 465 aaKnown RBP5.28□□□□□ -1.56
VPS8-217ENST00000465213 ADAM2Q99965 735 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 TDP1Q9NUW8 608 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 LZTS1Q9Y250 596 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 ATP11BQ9Y2G3 1177 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 SPEF1Q9Y4P9 236 aa5.28□□□□□ -1.56
VPS8-217ENST00000465213 TCRBV7S2A1N4TA0A589 114 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 CCDC78A2IDD5 438 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 ESRRBO95718 433 aa5.27□□□□□ -1.57
VPS8-217ENST00000465213 CFIP05156 583 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms