RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
XRN1-204ENST00000465074 USTQ9Y2C2 406 aa13.2□□□□□ -0.3
XRN1-204ENST00000465074 DERAQ9Y315 318 aa13.2□□□□□ -0.3
XRN1-204ENST00000465074 DOCK6Q96HP0 2047 aa13.2□□□□□ -0.3
XRN1-204ENST00000465074 WDR27A2RRH5 827 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 PRR33A8MZF0 331 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 CLIC2O15247 247 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 EXTL3O43909 919 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 C1RP00736 705 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 LRG1P02750 347 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 ADRB2P07550 413 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 KRT19P08727 400 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 HNRNPA1P09651 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
XRN1-204ENST00000465074 OR4Q2P0C623 313 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 SLFN14P0C7P3 912 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 ODC1P11926 461 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 CMA1P23946 247 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 CYP2J2P51589 502 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 ADCY1Q08828 1119 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 EFCAB13Q8IY85 973 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 GPD1LQ8N335 351 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 ZNF461Q8TAF7 563 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
XRN1-204ENST00000465074 RSAD2Q8WXG1 361 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 PAGE5Q96GU1 130 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 FAM84AQ96KN4 292 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 SENP8Q96LD8 212 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 MYADMQ96S97 322 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
XRN1-204ENST00000465074 PDE11AQ9HCR9 933 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 EXOC1Q9NV70 894 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 SORCS3Q9UPU3 1222 aa13.19□□□□□ -0.3
XRN1-204ENST00000465074 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
XRN1-204ENST00000465074 SCN1AP35498 2009 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 M0QZQ0 153 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 PIRO00625 290 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 CYB561D2O14569 222 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 SPTLC1O15269 473 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
XRN1-204ENST00000465074 N4BP1O75113 896 aaKnown RBP13.18□□□□□ -0.3
XRN1-204ENST00000465074 SEC24AO95486 1093 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 ITGB3P05106 788 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 HOXD13P35453 343 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 SYKP43405 635 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 NDUFA8P51970 172 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 WNT7BP56706 349 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 MRPL58Q14197 206 aaKnown RBP13.18□□□□□ -0.3
XRN1-204ENST00000465074 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
XRN1-204ENST00000465074 OVOS1Q6IE37 1185 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 SLC8B1Q6J4K2 584 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 RNF19BQ6ZMZ0 732 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 METTL23Q86XA0 190 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 BRSK2Q8IWQ3 736 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 ZNF507Q8TCN5 953 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 ING5Q8WYH8 240 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 HSPBP1Q9NZL4 362 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 HCN4Q9Y3Q4 1203 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 R3HCC1Q9Y3T6 440 aaKnown RBP13.18□□□□□ -0.3
XRN1-204ENST00000465074 C2CD2Q9Y426 696 aa13.18□□□□□ -0.3
XRN1-204ENST00000465074 ANO9A1A5B4 782 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
XRN1-204ENST00000465074 ABLIM3O94929 683 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 POLR2BP30876 1174 aaKnown RBP13.17□□□□□ -0.3
XRN1-204ENST00000465074 TAF6P49848 677 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 SIGLEC14Q08ET2 396 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 BFSP1Q12934 665 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 SV2CQ496J9 727 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
XRN1-204ENST00000465074 CNNM4Q6P4Q7 775 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 HS2ST1Q7LGA3 356 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 CBWD2Q8IUF1 395 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 ELMOD1Q8N336 334 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 ITFG1Q8TB96 612 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 CORO1BQ9BR76 489 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 KCNK12Q9HB15 430 aa13.17□□□□□ -0.3
XRN1-204ENST00000465074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.3
XRN1-204ENST00000465074 DNMT3BQ9UBC3 853 aaKnown RBP13.17□□□□□ -0.3
XRN1-204ENST00000465074 PVALEFA0A1B0GWK0 134 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 TBC1D4O60343 1298 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 CLSTN1O94985 981 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 OAZ2O95190 189 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 LAMP2P13473 410 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 ATF2P15336 505 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 PTPN2P17706 415 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 HOXA9P31269 272 aa13.16□□□□□ -0.3
XRN1-204ENST00000465074 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.3
XRN1-204ENST00000465074 TDGQ13569 410 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms