RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
APP-213ENST00000464867 MYBPHLA2RUH7 354 aa10.45□□□□□ -0.74
APP-213ENST00000464867 CYSRT1A8MQ03 144 aa10.45□□□□□ -0.74
APP-213ENST00000464867 CDX4O14627 284 aaPredicted RBP10.45□□□□□ -0.74
APP-213ENST00000464867 PRRG1O14668 218 aa10.45□□□□□ -0.74
APP-213ENST00000464867 CHADO15335 359 aa10.45□□□□□ -0.74
APP-213ENST00000464867 PLEKHA8P1O95397 391 aa10.45□□□□□ -0.74
APP-213ENST00000464867 CAPNS1P04632 268 aa10.45□□□□□ -0.74
APP-213ENST00000464867 PLA2G2AP14555 144 aa10.45□□□□□ -0.74
APP-213ENST00000464867 SFNP31947 248 aa10.45□□□□□ -0.74
APP-213ENST00000464867 VIPR2P41587 438 aa10.45□□□□□ -0.74
APP-213ENST00000464867 GRIK3Q13003 919 aa10.45□□□□□ -0.74
APP-213ENST00000464867 PON2Q15165 354 aa10.45□□□□□ -0.74
APP-213ENST00000464867 TARBP2Q15633 366 aaKnown RBP10.45□□□□□ -0.74
APP-213ENST00000464867 ZNF423Q2M1K9 1284 aa10.45□□□□□ -0.74
APP-213ENST00000464867 UBXN11Q5T124 520 aa10.45□□□□□ -0.74
APP-213ENST00000464867 IQCEQ6IPM2 695 aa10.45□□□□□ -0.74
APP-213ENST00000464867 NFXL1Q6ZNB6 911 aa10.45□□□□□ -0.74
APP-213ENST00000464867 CMTR1Q8N1G2 835 aaKnown RBP10.45□□□□□ -0.74
APP-213ENST00000464867 ELMOD1Q8N336 334 aa10.45□□□□□ -0.74
APP-213ENST00000464867 CCDC82Q8N4S0 544 aa10.45□□□□□ -0.74
APP-213ENST00000464867 SMG8Q8ND04 991 aaKnown RBP10.45□□□□□ -0.74
APP-213ENST00000464867 NCOA7Q8NI08 942 aa10.45□□□□□ -0.74
APP-213ENST00000464867 RABGGTAQ92696 567 aa10.45□□□□□ -0.74
APP-213ENST00000464867 CCDC51Q96ER9 411 aa10.45□□□□□ -0.74
APP-213ENST00000464867 NIFKQ9BYG3 293 aaKnown RBP10.45□□□□□ -0.74
APP-213ENST00000464867 MIOSQ9NXC5 875 aa10.45□□□□□ -0.74
APP-213ENST00000464867 SPTA1P02549 2419 aa10.45□□□□□ -0.74
APP-213ENST00000464867 APC2O95996 2303 aa10.45□□□□□ -0.74
APP-213ENST00000464867 THADAQ6YHU6 1953 aa10.45□□□□□ -0.74
APP-213ENST00000464867 IGKV6-21A0A0C4DH24 114 aa10.44□□□□□ -0.74
APP-213ENST00000464867 WDR27A2RRH5 827 aa10.44□□□□□ -0.74
APP-213ENST00000464867 HEPACAM2A8MVW5 462 aa10.44□□□□□ -0.74
APP-213ENST00000464867 SRGAP2CP0DJJ0 459 aa10.44□□□□□ -0.74
APP-213ENST00000464867 CALM1P0DP23 149 aa10.44□□□□□ -0.74
APP-213ENST00000464867 CALM2P0DP24 149 aa10.44□□□□□ -0.74
APP-213ENST00000464867 CALM3P0DP25 149 aa10.44□□□□□ -0.74
APP-213ENST00000464867 AXLP30530 894 aa10.44□□□□□ -0.74
APP-213ENST00000464867 HOXA11P31270 313 aaPredicted RBP10.44□□□□□ -0.74
APP-213ENST00000464867 HOXC13P31276 330 aa10.44□□□□□ -0.74
APP-213ENST00000464867 SOX9P48436 509 aa10.44□□□□□ -0.74
APP-213ENST00000464867 JAK3P52333 1124 aa10.44□□□□□ -0.74
APP-213ENST00000464867 NR1H3Q13133 447 aa10.44□□□□□ -0.74
APP-213ENST00000464867 CCINQ13939 588 aa10.44□□□□□ -0.74
APP-213ENST00000464867 PTPAQ15257 358 aa10.44□□□□□ -0.74
APP-213ENST00000464867 XKR3Q5GH77 459 aa10.44□□□□□ -0.74
APP-213ENST00000464867 PRSS36Q5K4E3 855 aa10.44□□□□□ -0.74
APP-213ENST00000464867 NOTUMQ6P988 496 aa10.44□□□□□ -0.74
APP-213ENST00000464867 CYP2U1Q7Z449 544 aa10.44□□□□□ -0.74
APP-213ENST00000464867 HDDC3Q8N4P3 179 aa10.44□□□□□ -0.74
APP-213ENST00000464867 ZSCAN18Q8TBC5 510 aaPredicted RBP10.44□□□□□ -0.74
APP-213ENST00000464867 HASPINQ8TF76 798 aa10.44□□□□□ -0.74
APP-213ENST00000464867 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
APP-213ENST00000464867 GPR88Q9GZN0 384 aa10.44□□□□□ -0.74
APP-213ENST00000464867 SLITRK6Q9H5Y7 841 aa10.44□□□□□ -0.74
APP-213ENST00000464867 IFT122Q9HBG6 1241 aa10.44□□□□□ -0.74
APP-213ENST00000464867 HES2Q9Y543 173 aa10.44□□□□□ -0.74
APP-213ENST00000464867 RAI2Q9Y5P3 530 aa10.44□□□□□ -0.74
APP-213ENST00000464867 COL4A3BPQ9Y5P4 624 aa10.44□□□□□ -0.74
APP-213ENST00000464867 ATG2BQ96BY7 2078 aa10.44□□□□□ -0.74
APP-213ENST00000464867 ZNF462Q96JM2 2506 aa10.44□□□□□ -0.74
APP-213ENST00000464867 IGLV3-22A0A075B6J6 115 aa10.43□□□□□ -0.74
APP-213ENST00000464867 FAM181BA6NEQ2 426 aa10.43□□□□□ -0.74
APP-213ENST00000464867 SMCO2A6NFE2 343 aa10.43□□□□□ -0.74
APP-213ENST00000464867 CCDC69A6NI79 296 aa10.43□□□□□ -0.74
APP-213ENST00000464867 CCER2I3L3R5 266 aa10.43□□□□□ -0.74
APP-213ENST00000464867 ARNTLO00327 626 aa10.43□□□□□ -0.74
APP-213ENST00000464867 ADAM12O43184 909 aa10.43□□□□□ -0.74
APP-213ENST00000464867 MAFO75444 373 aaPredicted RBP10.43□□□□□ -0.74
APP-213ENST00000464867 PRB1P04280 392 aa10.43□□□□□ -0.74
APP-213ENST00000464867 IRX4P78413 519 aa10.43□□□□□ -0.74
APP-213ENST00000464867 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
APP-213ENST00000464867 HNRNPDQ14103 355 aaKnown RBP10.43□□□□□ -0.74
APP-213ENST00000464867 PCBP1Q15365 356 aaKnown RBP eCLIP10.43□□□□□ -0.74
APP-213ENST00000464867 LARP1BQ659C4 914 aaKnown RBP10.43□□□□□ -0.74
APP-213ENST00000464867 TXNDC11Q6PKC3 985 aa10.43□□□□□ -0.74
APP-213ENST00000464867 EXOC8Q8IYI6 725 aa10.43□□□□□ -0.74
APP-213ENST00000464867 TMTC2Q8N394 836 aa10.43□□□□□ -0.74
APP-213ENST00000464867 LEMD2Q8NC56 503 aa10.43□□□□□ -0.74
APP-213ENST00000464867 TCEAL4Q96EI5 215 aa10.43□□□□□ -0.74
APP-213ENST00000464867 ZNF512Q96ME7 567 aaPredicted RBP10.43□□□□□ -0.74
APP-213ENST00000464867 NUSAP1Q9BXS6 441 aaKnown RBP10.43□□□□□ -0.74
APP-213ENST00000464867 TRPV4Q9HBA0 871 aa10.43□□□□□ -0.74
APP-213ENST00000464867 RAXQ9Y2V3 346 aa10.43□□□□□ -0.74
APP-213ENST00000464867 CDY1Q9Y6F8 540 aa10.43□□□□□ -0.74
APP-213ENST00000464867 ABCA7Q8IZY2 2146 aa10.43□□□□□ -0.74
APP-213ENST00000464867 VWA8A3KMH1 1905 aa10.43□□□□□ -0.74
APP-213ENST00000464867 ARHGEF37A1IGU5 675 aa10.42□□□□□ -0.74
APP-213ENST00000464867 MEFVO15553 781 aaPredicted RBP10.42□□□□□ -0.74
APP-213ENST00000464867 CHMP2AO43633 222 aa10.42□□□□□ -0.74
APP-213ENST00000464867 CYP3A4P08684 503 aa10.42□□□□□ -0.74
APP-213ENST00000464867 MAPK8P45983 427 aa10.42□□□□□ -0.74
APP-213ENST00000464867 ATXN3P54252 364 aaPredicted RBP10.42□□□□□ -0.74
APP-213ENST00000464867 GRSF1Q12849 480 aaKnown RBP eCLIP10.42□□□□□ -0.74
APP-213ENST00000464867 TUSC3Q13454 348 aa10.42□□□□□ -0.74
APP-213ENST00000464867 ARHGAP29Q52LW3 1261 aa10.42□□□□□ -0.74
APP-213ENST00000464867 USP39Q53GS9 565 aaKnown RBP10.42□□□□□ -0.74
APP-213ENST00000464867 PRR16Q569H4 304 aa10.42□□□□□ -0.74
APP-213ENST00000464867 CASC1Q6TDU7 716 aa10.42□□□□□ -0.74
APP-213ENST00000464867 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms