RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 CETN3O15182 167 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 PHACTR2O75167 634 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 KRT13P13646 458 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 PAX3P23760 479 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 LTBRP36941 435 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 CASP4P49662 377 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 KCNQ1P51787 676 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 CLCN4P51793 760 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 RBP5P82980 135 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 YWHAHQ04917 246 aaPredicted RBP12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 BFSP1Q12934 665 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 MYO1EQ12965 1108 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 MORC3Q14149 939 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 NFIL3Q16649 462 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 EDRF1Q3B7T1 1238 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 LEXMQ3ZCV2 418 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 ZNF280DQ6N043 979 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 FAM186BQ8IYM0 893 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 TRIML1Q8N9V2 468 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 TMEM174Q8WUU8 243 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 DHTKD1Q96HY7 919 aaPredicted RBP12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 SENP8Q96LD8 212 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 ASB2Q96Q27 587 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 DZANK1Q9NVP4 752 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 CLEC1BQ9P126 229 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 MTRRQ9UBK8 725 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 DPP7Q9UHL4 492 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 FAM50BQ9Y247 325 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 CDY1Q9Y6F8 540 aa12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 SPTBN5Q9NRC6 3674 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-211ENST00000464783 TRIM49BA6NDI0 452 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 M0QZQ0 153 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 CYB561D2O14569 222 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 SPTLC1O15269 473 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 AKAP3O75969 853 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 SPATA31D3P0C874 917 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 OR1D2P34982 312 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 PSMC2P35998 433 aaKnown RBP12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 AARSP49588 968 aaKnown RBP eCLIP12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 ARPP19P56211 112 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 LRRC63Q05C16 580 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 BIRC3Q13489 604 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 TRPC3Q13507 836 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 KCNC3Q14003 757 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 PUS10Q3MIT2 529 aaKnown RBP12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 CTXN3Q4LDR2 81 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 CENPPQ6IPU0 288 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 ANKRD54Q6NXT1 300 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 TMEM184AQ6ZMB5 413 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 SPATA31D4Q6ZUB0 917 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 METTL23Q86XA0 190 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 LRRC52Q8N7C0 313 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 SLC22A17Q8WUG5 538 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 CLSTN3Q9BQT9 956 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 APOL5Q9BWW9 433 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 MAN1C1Q9NR34 630 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 DSEQ9UL01 958 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 CTNND2Q9UQB3 1225 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 BACE2Q9Y5Z0 518 aa12.97□□□□□ -0.33
RPUSD3-211ENST00000464783 C2orf16Q68DN1 1984 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 BICDL2A1A5D9 508 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 LRRIQ3A6PVS8 624 aaPredicted RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 MAPK13O15264 365 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 TGM5O43548 720 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 MBD3O95983 291 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 EPB41P11171 864 aaKnown RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 HOXB8P17481 243 aaPredicted RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 CCNE1P24864 410 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 VAMP7P51809 220 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 AP3M2P53677 418 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 FKBP3Q00688 224 aaKnown RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 SMAD4Q13485 552 aaKnown RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 OVOS1Q6IE37 1185 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 GPT2Q8TD30 523 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 PARD3BQ8TEW8 1205 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 NELFBQ8WX92 580 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 EEF2KMTQ96G04 330 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 MSLNLQ96KJ4 702 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 SFXN1Q9H9B4 322 aa12.96□□□□□ -0.33
RPUSD3-211ENST00000464783 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 ADAM12O43184 909 aa12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 HUS1O60921 280 aa12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 CPB1P15086 417 aa12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 TYMPP19971 482 aa12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 BMP6P22004 513 aa12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 DLG4P78352 724 aa12.95□□□□□ -0.34
RPUSD3-211ENST00000464783 PAK1Q13153 545 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms