RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RBM10P98175 930 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 TFF2Q03403 129 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 DLX2Q07687 328 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 VARS2Q5ST30 1063 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 KLHL10Q6JEL2 608 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 CXorf38Q8TB03 319 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 PLEKHO2Q8TD55 490 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 SLC22A17Q8WUG5 538 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 SENP8Q96LD8 212 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 ZNF560Q96MR9 790 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 CLSTN3Q9BQT9 956 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 GZF1Q9H116 711 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 SIX4Q9UIU6 781 aa15.66■□□□□ 0.1
SQSTM1-205ENST00000464493 TRIM49BA6NDI0 452 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 H3BQ06 376 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 TBX10O75333 385 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 MBD3O95983 291 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 CLCN4P51793 760 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 AP3M2P53677 418 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 CLDN10P78369 228 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 FKBP3Q00688 224 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 MRPL58Q14197 206 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 AAK1Q2M2I8 961 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 SV2CQ496J9 727 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 SCARA3Q6AZY7 606 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 INTS8Q75QN2 995 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 TRAPPC11Q7Z392 1133 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 USP37Q86T82 979 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 GLYCTKQ8IVS8 523 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.65■□□□□ 0.13e-7■■■□□ 14.7
SQSTM1-205ENST00000464493 FAM186BQ8IYM0 893 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 LRRC52Q8N7C0 313 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 TMC2Q8TDI7 906 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 ATXN2LQ8WWM7 1075 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 NELFBQ8WX92 580 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 ZNF516Q92618 1163 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 CASP10Q92851 521 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 EEF2KMTQ96G04 330 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 BORCS6Q96GS4 357 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 CLEC1BQ9P126 229 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 MTRRQ9UBK8 725 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 BARX2Q9UMQ3 279 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 BACE2Q9Y5Z0 518 aa15.65■□□□□ 0.1
SQSTM1-205ENST00000464493 ARHGEF37A1IGU5 675 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 LRRIQ3A6PVS8 624 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 KPNA7A9QM74 516 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 H7C4K7 107 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 CYB561D2O14569 222 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 GLUD1P00367 558 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 C1RP00736 705 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 ODC1P11926 461 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 KRT13P13646 458 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 EPCAMP16422 314 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 TYMPP19971 482 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 VAMP7P51809 220 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 DLG4P78352 724 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 MRPS5P82675 430 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 LEXMQ3ZCV2 418 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 PALB2Q86YC2 1186 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 ZC3H3Q8IXZ2 948 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 MKNK1Q9BUB5 465 aa15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 TIMM13Q9Y5L4 95 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-205ENST00000464493 BICDL2A1A5D9 508 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 IKBKBO14920 756 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 ADAM12O43184 909 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 TGM5O43548 720 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 TBC1D4O60343 1298 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 OAZ2O95190 189 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 CST3P01034 146 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 C4BPAP04003 597 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 EPB41P11171 864 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 OR1D2P34982 312 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 YWHAHQ04917 246 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 ENPEPQ07075 957 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 BFSP1Q12934 665 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 MYO1EQ12965 1108 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 PAK1Q13153 545 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 CTXN3Q4LDR2 81 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 ANKRD54Q6NXT1 300 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 FOXR2Q6PJQ5 311 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 RSPO2Q6UXX9 243 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 MLKLQ8NB16 471 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 HPDLQ96IR7 371 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 MSLNLQ96KJ4 702 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 DPP7Q9UHL4 492 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 CD207Q9UJ71 328 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 DSEQ9UL01 958 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 CTNND2Q9UQB3 1225 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 CDY1Q9Y6F8 540 aa15.63■□□□□ 0.09
SQSTM1-205ENST00000464493 SLC16A3O15427 465 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 PHACTR2O75167 634 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 HOXB8P17481 243 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 STX17P56962 302 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 BIRC3Q13489 604 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 TRPC3Q13507 836 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 RAB33AQ14088 237 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 CLUL1Q15846 466 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 C1orf220Q5T0J3 134 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 OVOS1Q6IE37 1185 aa15.62■□□□□ 0.09
SQSTM1-205ENST00000464493 SLC8B1Q6J4K2 584 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms